Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.61□□□□□ -1.83
SHROOM3Q8TF72 AL133162.1-201ENST00000463228 453 ntBASIC3.61□□□□□ -1.83
SHROOM3Q8TF72 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.61□□□□□ -1.83
SHROOM3Q8TF72 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.61□□□□□ -1.83
SHROOM3Q8TF72 AC141257.3-201ENST00000572906 215 ntBASIC3.61□□□□□ -1.83
SHROOM3Q8TF72 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.61□□□□□ -1.83
SHROOM3Q8TF72 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.61□□□□□ -1.83
SHROOM3Q8TF72 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.61□□□□□ -1.83
SHROOM3Q8TF72 AL158196.1-201ENST00000616786 434 ntBASIC3.61□□□□□ -1.83
SHROOM3Q8TF72 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.61□□□□□ -1.83
SHROOM3Q8TF72 AC127502.3-201ENST00000636170 1206 ntBASIC3.61□□□□□ -1.83
SHROOM3Q8TF72 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.61□□□□□ -1.83
SHROOM3Q8TF72 NAMPTP1-201ENST00000440465 2514 ntBASIC3.61□□□□□ -1.83
SHROOM3Q8TF72 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.61□□□□□ -1.83
SHROOM3Q8TF72 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SHROOM3Q8TF72 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SHROOM3Q8TF72 AC012078.1-201ENST00000405035 1646 ntBASIC3.61□□□□□ -1.83
SHROOM3Q8TF72 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SHROOM3Q8TF72 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SHROOM3Q8TF72 UBE2V1P2-201ENST00000397758 440 ntBASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 MTND4LP20-201ENST00000402379 270 ntBASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 LAP3P1-201ENST00000403648 294 ntBASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 NPM1P48-201ENST00000436002 853 ntBASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 SKP1P1-201ENST00000438081 489 ntBASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 ANP32BP2-201ENST00000454525 545 ntBASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 AC025518.1-201ENST00000479856 347 ntBASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 RFPL4AP5-201ENST00000514977 504 ntBASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 BNIP3P38-201ENST00000601117 544 ntBASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 AL158062.1-201ENST00000619632 745 ntBASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 MTCO1P22-201ENST00000604619 1360 ntBASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 AL034403.1-201ENST00000399414 885 ntBASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 DPY19L1P2-201ENST00000426647 915 ntBASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 TMED11P-201ENST00000479478 690 ntBASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 MIR5186-201ENST00000577504 120 ntBASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 AC067852.3-201ENST00000589177 561 ntBASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 AL732372.2-225ENST00000642124 456 ntBASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.6□□□□□ -1.83
SHROOM3Q8TF72 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SHROOM3Q8TF72 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.59□□□□□ -1.83
SHROOM3Q8TF72 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
SHROOM3Q8TF72 RNA5SP50-201ENST00000363731 107 ntBASIC3.59□□□□□ -1.83
SHROOM3Q8TF72 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.59□□□□□ -1.83
SHROOM3Q8TF72 AL035423.1-201ENST00000420331 213 ntBASIC3.59□□□□□ -1.83
SHROOM3Q8TF72 RPS26P47-201ENST00000427219 348 ntBASIC3.59□□□□□ -1.83
SHROOM3Q8TF72 CYCSP4-201ENST00000429682 331 ntBASIC3.59□□□□□ -1.83
SHROOM3Q8TF72 AC006994.1-201ENST00000438212 839 ntBASIC3.59□□□□□ -1.83
SHROOM3Q8TF72 AL831737.1-201ENST00000441288 271 ntBASIC3.59□□□□□ -1.83
SHROOM3Q8TF72 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SHROOM3Q8TF72 AC133473.1-201ENST00000455173 299 ntBASIC3.59□□□□□ -1.83
SHROOM3Q8TF72 RPL32P34-201ENST00000486380 400 ntBASIC3.59□□□□□ -1.83
SHROOM3Q8TF72 AC005726.1-201ENST00000494679 427 ntBASIC3.59□□□□□ -1.83
SHROOM3Q8TF72 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.59□□□□□ -1.83
SHROOM3Q8TF72 SCARNA20.6-201ENST00000517251 106 ntBASIC3.59□□□□□ -1.83
SHROOM3Q8TF72 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.59□□□□□ -1.83
SHROOM3Q8TF72 AC105036.1-201ENST00000566222 271 ntBASIC3.59□□□□□ -1.83
SHROOM3Q8TF72 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.59□□□□□ -1.83
SHROOM3Q8TF72 MTCO3P22-201ENST00000603219 784 ntBASIC3.59□□□□□ -1.83
SHROOM3Q8TF72 AC079880.2-201ENST00000603790 1213 ntBASIC3.59□□□□□ -1.83
SHROOM3Q8TF72 AL354976.1-201ENST00000613843 387 ntBASIC3.59□□□□□ -1.83
SHROOM3Q8TF72 AP003072.5-201ENST00000623872 773 ntBASIC3.59□□□□□ -1.83
SHROOM3Q8TF72 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.59□□□□□ -1.83
SHROOM3Q8TF72 PROS2P-201ENST00000474651 1951 ntBASIC3.59□□□□□ -1.84
SHROOM3Q8TF72 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.59□□□□□ -1.84
SHROOM3Q8TF72 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
SHROOM3Q8TF72 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 AL356968.1-201ENST00000416622 474 ntBASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 USP9YP36-201ENST00000424581 829 ntBASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 USP9YP31-201ENST00000431405 881 ntBASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 ATP5JP1-201ENST00000431631 322 ntBASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 PTP4A1P3-201ENST00000433661 420 ntBASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 AL671855.1-201ENST00000446875 1203 ntBASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 S100A11P2-201ENST00000467589 312 ntBASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 ACTG1P13-201ENST00000486987 1043 ntBASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 AC093663.1-201ENST00000497190 394 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms