Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
NUP43Q8NFH3 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
NUP43Q8NFH3 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 Y_RNA.58-201ENST00000362807 102 ntBASIC5.33□□□□□ -1.56
NUP43Q8NFH3 Y_RNA.154-201ENST00000363624 102 ntBASIC5.33□□□□□ -1.56
NUP43Q8NFH3 SNORA51.2-201ENST00000364595 132 ntBASIC5.33□□□□□ -1.56
NUP43Q8NFH3 RNY3P1-201ENST00000365085 102 ntBASIC5.33□□□□□ -1.56
NUP43Q8NFH3 RNU6-359P-201ENST00000365466 108 ntBASIC5.33□□□□□ -1.56
NUP43Q8NFH3 RNY3-201ENST00000365484 102 ntBASIC5.33□□□□□ -1.56
NUP43Q8NFH3 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 Y_RNA.490-201ENST00000384413 102 ntBASIC5.33□□□□□ -1.56
NUP43Q8NFH3 RNU6-952P-201ENST00000391164 108 ntBASIC5.33□□□□□ -1.56
NUP43Q8NFH3 OR10T1P-201ENST00000424327 947 ntBASIC5.33□□□□□ -1.56
NUP43Q8NFH3 OR51AB1P-201ENST00000429046 620 ntBASIC5.33□□□□□ -1.56
NUP43Q8NFH3 AC022022.1-201ENST00000430304 178 ntBASIC5.33□□□□□ -1.56
NUP43Q8NFH3 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 SEPT14P3-201ENST00000439401 183 ntBASIC5.33□□□□□ -1.56
NUP43Q8NFH3 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 AL732372.2-207ENST00000445840 183 ntBASIC5.33□□□□□ -1.56
NUP43Q8NFH3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 ARPC3P5-201ENST00000448802 534 ntBASIC5.33□□□□□ -1.56
NUP43Q8NFH3 AC140076.1-201ENST00000449897 361 ntBASIC5.33□□□□□ -1.56
NUP43Q8NFH3 SEPT14P2-201ENST00000453405 183 ntBASIC5.33□□□□□ -1.56
NUP43Q8NFH3 AC083798.1-201ENST00000472671 131 ntBASIC5.33□□□□□ -1.56
NUP43Q8NFH3 RPS17P15-201ENST00000475609 349 ntBASIC5.33□□□□□ -1.56
NUP43Q8NFH3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 AC009120.1-201ENST00000493458 473 ntBASIC5.33□□□□□ -1.56
NUP43Q8NFH3 AC093278.1-201ENST00000494700 600 ntBASIC5.33□□□□□ -1.56
NUP43Q8NFH3 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.33□□□□□ -1.56
NUP43Q8NFH3 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 TMEM251P1-201ENST00000503717 318 ntBASIC5.33□□□□□ -1.56
NUP43Q8NFH3 GLUD1P3-202ENST00000508551 200 ntBASIC5.33□□□□□ -1.56
NUP43Q8NFH3 SEPT14P4-201ENST00000513445 186 ntBASIC5.33□□□□□ -1.56
NUP43Q8NFH3 SCARNA21.2-201ENST00000516600 166 ntBASIC5.33□□□□□ -1.56
NUP43Q8NFH3 RNU6-835P-201ENST00000516974 104 ntBASIC5.33□□□□□ -1.56
NUP43Q8NFH3 FO082796.1-201ENST00000523795 183 ntBASIC5.33□□□□□ -1.56
NUP43Q8NFH3 TRIM77BP-201ENST00000524985 1119 ntBASIC5.33□□□□□ -1.56
NUP43Q8NFH3 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.33□□□□□ -1.56
NUP43Q8NFH3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NUP43Q8NFH3 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 NMD3P1-201ENST00000439704 1488 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AC004158.1-201ENST00000564508 4319 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AC025470.1-201ENST00000510053 2032 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 CKAP2P1-201ENST00000555477 2049 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 Y_RNA.46-201ENST00000362695 102 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 RN7SKP275-201ENST00000364626 301 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 Y_RNA.381-201ENST00000365666 102 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 Y_RNA.419-201ENST00000384041 102 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 RPS4XP8-201ENST00000402039 771 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 RPL7P58-201ENST00000402913 758 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AC096921.1-201ENST00000411661 375 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 TMEM183AP1-205ENST00000432739 290 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AC010881.1-201ENST00000433830 235 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 RPS3AP54-201ENST00000435535 734 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AL031663.1-201ENST00000437445 219 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 SBDSP1-204ENST00000453858 737 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AC021660.1-201ENST00000465006 554 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AC012123.2-201ENST00000485809 248 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms