Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 RN7SL41P-201ENST00000476144 297 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 GAPDHP36-201ENST00000480688 918 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 AC025164.1-201ENST00000496249 478 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 MTCYBP37-201ENST00000510642 1133 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 IGJP1-201ENST00000522682 475 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 AC024909.2-201ENST00000553035 286 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 AC009117.1-201ENST00000563948 554 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 BGLT3-201ENST00000564523 994 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 RN7SL652P-201ENST00000577769 300 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 VN1R88P-201ENST00000596787 292 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 AC133644.2-201ENST00000608142 540 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 AL451074.6-201ENST00000608512 729 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 SDR42E1P1-201ENST00000611327 477 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 AC023509.5-201ENST00000617434 807 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 Z69908.1-201ENST00000622603 247 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 RNF6P1-201ENST00000444889 1784 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 AC012020.1-201ENST00000624541 1728 ntBASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLIP4Q8N3C7 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 RHOT1P2-201ENST00000366423 333 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 RPS3AP26-201ENST00000398259 784 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 NRBF2P2-201ENST00000413087 861 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AC010153.1-201ENST00000432862 727 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 MTCO2P16-201ENST00000436962 677 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AL606662.1-201ENST00000445763 553 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 H2AFZP5-201ENST00000446960 382 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AC104306.1-201ENST00000449702 371 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AL591363.1-201ENST00000450091 483 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AC063943.1-201ENST00000465434 453 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AC074386.1-201ENST00000476560 767 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 GAPDHP39-201ENST00000481866 979 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AC093270.2-201ENST00000486157 792 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 RPS4XP14-201ENST00000493072 781 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AC005912.1-201ENST00000495392 255 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AC080014.1-201ENST00000496877 1201 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 WBP1LP4-201ENST00000505043 344 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 RNU6-347P-201ENST00000516658 105 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 HMGB1P23-201ENST00000518743 568 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 OR4C2P-201ENST00000530855 1064 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AP001317.1-201ENST00000531194 960 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 CYCSP28-201ENST00000534284 321 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 SULT1C2P2-201ENST00000562517 294 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AL121834.1-201ENST00000572284 509 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 OR7E18P-201ENST00000592589 702 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 VN1R82P-201ENST00000601481 356 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AC069545.1-201ENST00000605671 358 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AC026368.1-201ENST00000614934 690 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AF246928.1-201ENST00000623768 87 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AC007494.3-201ENST00000624660 743 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AL356121.2-201ENST00000624715 780 ntBASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.28□□□□□ -1.72
CLIP4Q8N3C7 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.27□□□□□ -1.73
CLIP4Q8N3C7 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLIP4Q8N3C7 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.27□□□□□ -1.73
CLIP4Q8N3C7 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms