Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 AC073310.1-201ENST00000423226 1033 ntBASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 AC092017.2-201ENST00000427600 362 ntBASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 AC083863.1-201ENST00000438811 231 ntBASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 VN1R25P-201ENST00000443385 738 ntBASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 EIF4A1P11-201ENST00000451239 222 ntBASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 VN1R40P-201ENST00000455196 941 ntBASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 AL133477.1-201ENST00000457472 514 ntBASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 AC106872.2-201ENST00000494303 480 ntBASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 NAMPTP2-201ENST00000505629 1115 ntBASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 AC010460.1-201ENST00000507087 466 ntBASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 GNRHR2P1-201ENST00000555315 631 ntBASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 AC027104.1-201ENST00000563702 681 ntBASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 MIR4286-201ENST00000580651 93 ntBASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 AC053481.4-201ENST00000583164 216 ntBASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 AC115085.1-201ENST00000588924 229 ntBASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 DNAJC19P3-201ENST00000594491 331 ntBASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 AC125494.3-201ENST00000602759 455 ntBASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 AL606490.9-201ENST00000603331 271 ntBASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 STMN1P1-201ENST00000617809 440 ntBASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 FRG1HP-204ENST00000617940 757 ntBASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 SEC63P2-201ENST00000503863 1939 ntBASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 RNU6-543P-201ENST00000362576 108 ntBASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 RNU6-354P-201ENST00000383862 107 ntBASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 RNU6-610P-201ENST00000384264 107 ntBASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 AL138878.1-201ENST00000405131 347 ntBASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 RPL7AP73-201ENST00000413490 353 ntBASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 AC006511.1-201ENST00000470614 315 ntBASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 TRBV8-2-201ENST00000475637 270 ntBASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 RPL31P61-201ENST00000496160 376 ntBASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 MTCO3P27-201ENST00000514397 196 ntBASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 RNU5A-7P-201ENST00000515979 116 ntBASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 AP003355.1-201ENST00000518956 587 ntBASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 NDUFA5P2-201ENST00000519723 344 ntBASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 AC087369.1-201ENST00000520775 996 ntBASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 AC083923.1-201ENST00000523708 376 ntBASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 AC099676.1-201ENST00000608886 657 ntBASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 AC006946.3-201ENST00000609791 756 ntBASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 AP000255.1-201ENST00000610276 676 ntBASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 AL133445.2-201ENST00000611191 527 ntBASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 AC078880.5-201ENST00000617845 421 ntBASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 AC024595.1-201ENST00000623088 387 ntBASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 AC073530.2-201ENST00000623987 261 ntBASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 CR392039.4-201ENST00000624968 501 ntBASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms