Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 OR5AQ1P-201ENST00000527596 927 ntBASIC5.34□□□□□ -1.55
TRIM48Q8IWZ4 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM48Q8IWZ4 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM48Q8IWZ4 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.34□□□□□ -1.55
TRIM48Q8IWZ4 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM48Q8IWZ4 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM48Q8IWZ4 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM48Q8IWZ4 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM48Q8IWZ4 MIR1269B-201ENST00000580405 75 ntBASIC5.34□□□□□ -1.55
TRIM48Q8IWZ4 AP001180.3-201ENST00000582221 145 ntBASIC5.34□□□□□ -1.55
TRIM48Q8IWZ4 DUXAP4-201ENST00000603046 613 ntBASIC5.34□□□□□ -1.55
TRIM48Q8IWZ4 AC009994.1-201ENST00000606889 253 ntBASIC5.34□□□□□ -1.55
TRIM48Q8IWZ4 SDR42E1P1-201ENST00000611327 477 ntBASIC5.34□□□□□ -1.55
TRIM48Q8IWZ4 AC002553.4-201ENST00000616896 331 ntBASIC5.34□□□□□ -1.55
TRIM48Q8IWZ4 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM48Q8IWZ4 AC136475.10-201ENST00000620253 385 ntBASIC5.34□□□□□ -1.55
TRIM48Q8IWZ4 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM48Q8IWZ4 AC005618.4-201ENST00000625053 554 ntBASIC5.34□□□□□ -1.55
TRIM48Q8IWZ4 AC074101.1-201ENST00000637861 241 ntBASIC5.34□□□□□ -1.55
TRIM48Q8IWZ4 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TRIM48Q8IWZ4 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM48Q8IWZ4 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM48Q8IWZ4 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.34□□□□□ -1.56
TRIM48Q8IWZ4 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.34□□□□□ -1.56
TRIM48Q8IWZ4 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
TRIM48Q8IWZ4 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
TRIM48Q8IWZ4 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
TRIM48Q8IWZ4 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 RLIMP2-201ENST00000427891 1563 ntBASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 AL022322.2-201ENST00000624072 20397 ntBASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 U3.7-201ENST00000363668 216 ntBASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 RNU6-876P-201ENST00000391295 104 ntBASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 AL513174.1-201ENST00000423182 629 ntBASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 RIMKLBP2-201ENST00000424737 654 ntBASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 GSTM5P1-201ENST00000434751 660 ntBASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 RPL5P25-201ENST00000441148 775 ntBASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 AL163193.1-201ENST00000444895 788 ntBASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 AL672138.1-201ENST00000450604 1015 ntBASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 FABP3P2-201ENST00000453169 399 ntBASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 Z82190.1-201ENST00000454534 490 ntBASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 MTCO3P20-201ENST00000454926 688 ntBASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 OR6K1P-201ENST00000456766 971 ntBASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 RPL37P3-201ENST00000456825 293 ntBASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 SNORD125-201ENST00000459538 96 ntBASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 RN7SL188P-201ENST00000469842 285 ntBASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 RPL7P6-201ENST00000480903 738 ntBASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 RNA5SP34-201ENST00000516887 130 ntBASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 AK6P1-201ENST00000540219 478 ntBASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 SNORD39.3-201ENST00000584451 71 ntBASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 AL512329.2-201ENST00000607350 548 ntBASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 AL359880.1-201ENST00000621879 266 ntBASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 SCARNA15-201ENST00000607520 4325 ntBASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 AP001029.2-203ENST00000589795 4910 ntBASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 CASC19-204ENST00000641001 2055 ntBASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
TRIM48Q8IWZ4 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 CASC19-280ENST00000642102 1351 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AC112198.2-201ENST00000426589 6996 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AC092681.1-201ENST00000297369 291 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 OR9K1P-201ENST00000326513 941 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms