Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.9□□□□□ -1.63
VRK3Q8IV63 NMNAT1P1-201ENST00000554095 876 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.9□□□□□ -1.63
VRK3Q8IV63 AC006349.1-201ENST00000555526 235 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.9□□□□□ -1.63
VRK3Q8IV63 AL117336.2-201ENST00000602435 335 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 AC087763.1-201ENST00000603391 286 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 AL365503.1-201ENST00000605247 905 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 AC009994.1-201ENST00000606889 253 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 AC126177.8-201ENST00000618339 1015 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.9□□□□□ -1.63
VRK3Q8IV63 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.9□□□□□ -1.63
VRK3Q8IV63 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.9□□□□□ -1.63
VRK3Q8IV63 MTND1P37-201ENST00000636562 264 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 FAM157B-203ENST00000639350 358 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 PCAT14-202ENST00000627127 3935 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.9□□□□□ -1.63
VRK3Q8IV63 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 PABPC1P9-201ENST00000426076 1612 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.9□□□□□ -1.63
VRK3Q8IV63 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VRK3Q8IV63 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VRK3Q8IV63 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.89□□□□□ -1.63
VRK3Q8IV63 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VRK3Q8IV63 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VRK3Q8IV63 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
VRK3Q8IV63 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.89□□□□□ -1.63
VRK3Q8IV63 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VRK3Q8IV63 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
VRK3Q8IV63 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.89□□□□□ -1.63
VRK3Q8IV63 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.89□□□□□ -1.63
VRK3Q8IV63 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VRK3Q8IV63 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VRK3Q8IV63 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
VRK3Q8IV63 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.89□□□□□ -1.63
VRK3Q8IV63 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VRK3Q8IV63 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.89□□□□□ -1.63
VRK3Q8IV63 AF186996.5-201ENST00000418098 904 ntBASIC4.89□□□□□ -1.63
VRK3Q8IV63 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.89□□□□□ -1.63
VRK3Q8IV63 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.89□□□□□ -1.63
VRK3Q8IV63 MTCO2P11-201ENST00000431069 680 ntBASIC4.89□□□□□ -1.63
VRK3Q8IV63 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.89□□□□□ -1.63
VRK3Q8IV63 SEPT7P5-201ENST00000434048 306 ntBASIC4.89□□□□□ -1.63
VRK3Q8IV63 PTMAP6-201ENST00000439110 327 ntBASIC4.89□□□□□ -1.63
VRK3Q8IV63 AL353093.1-201ENST00000441292 436 ntBASIC4.89□□□□□ -1.63
VRK3Q8IV63 OR7E125P-201ENST00000443450 846 ntBASIC4.89□□□□□ -1.63
VRK3Q8IV63 AL161722.1-201ENST00000446972 1032 ntBASIC4.89□□□□□ -1.63
VRK3Q8IV63 RPL23AP35-201ENST00000451906 501 ntBASIC4.89□□□□□ -1.63
VRK3Q8IV63 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.89□□□□□ -1.63
VRK3Q8IV63 RPS3AP17-201ENST00000472594 777 ntBASIC4.89□□□□□ -1.63
VRK3Q8IV63 RN7SL214P-201ENST00000487317 265 ntBASIC4.89□□□□□ -1.63
VRK3Q8IV63 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.89□□□□□ -1.63
VRK3Q8IV63 RN7SL244P-201ENST00000493405 297 ntBASIC4.89□□□□□ -1.63
VRK3Q8IV63 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.89□□□□□ -1.63
VRK3Q8IV63 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.89□□□□□ -1.63
VRK3Q8IV63 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VRK3Q8IV63 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.89□□□□□ -1.63
VRK3Q8IV63 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.89□□□□□ -1.63
VRK3Q8IV63 RAB11AP2-201ENST00000545905 639 ntBASIC4.89□□□□□ -1.63
VRK3Q8IV63 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.89□□□□□ -1.63
VRK3Q8IV63 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.89□□□□□ -1.63
VRK3Q8IV63 AC006504.3-201ENST00000586818 523 ntBASIC4.89□□□□□ -1.63
VRK3Q8IV63 AC078795.3-201ENST00000602913 472 ntBASIC4.89□□□□□ -1.63
VRK3Q8IV63 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.89□□□□□ -1.63
VRK3Q8IV63 AC010133.1-201ENST00000615809 842 ntBASIC4.89□□□□□ -1.63
VRK3Q8IV63 AC073348.1-201ENST00000623002 331 ntBASIC4.89□□□□□ -1.63
VRK3Q8IV63 AP002799.1-201ENST00000623552 423 ntBASIC4.89□□□□□ -1.63
VRK3Q8IV63 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.89□□□□□ -1.63
VRK3Q8IV63 LRRC77P-213ENST00000637727 880 ntBASIC4.89□□□□□ -1.63
VRK3Q8IV63 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.89□□□□□ -1.63
VRK3Q8IV63 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.89□□□□□ -1.63
VRK3Q8IV63 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VRK3Q8IV63 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.89□□□□□ -1.63
VRK3Q8IV63 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VRK3Q8IV63 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.89□□□□□ -1.63
VRK3Q8IV63 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
VRK3Q8IV63 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VRK3Q8IV63 AC135352.1-201ENST00000506173 1418 ntBASIC4.89□□□□□ -1.63
VRK3Q8IV63 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VRK3Q8IV63 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 CR383658.2-201ENST00000547576 1525 ntBASIC4.88□□□□□ -1.63
VRK3Q8IV63 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 SCARNA15-201ENST00000607520 4325 ntBASIC4.88□□□□□ -1.63
VRK3Q8IV63 HSPA8P18-201ENST00000439846 1928 ntBASIC4.88□□□□□ -1.63
VRK3Q8IV63 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VRK3Q8IV63 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VRK3Q8IV63 RNA5SP305-201ENST00000362665 119 ntBASIC4.88□□□□□ -1.63
VRK3Q8IV63 RNU4-12P-201ENST00000365233 139 ntBASIC4.88□□□□□ -1.63
VRK3Q8IV63 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 Y_RNA.450-201ENST00000384198 113 ntBASIC4.88□□□□□ -1.63
VRK3Q8IV63 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 ARL4AP5-201ENST00000404372 599 ntBASIC4.88□□□□□ -1.63
VRK3Q8IV63 AC092745.2-202ENST00000411880 369 ntBASIC4.88□□□□□ -1.63
VRK3Q8IV63 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VRK3Q8IV63 AC093084.1-201ENST00000424233 687 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 494.7 ms