Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 AC091046.2-201ENST00000620775 665 ntBASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 SGO1P1-201ENST00000603525 1447 ntBASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 SNORA31-201ENST00000362607 130 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 RNU1-20P-201ENST00000363314 162 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 FCF1P5-201ENST00000406490 482 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 RN7SKP199-201ENST00000410325 305 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 RPL21P108-201ENST00000413857 481 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 RPL26P29-201ENST00000415623 438 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 UBTFL3-201ENST00000418934 1024 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 RAD23BP1-201ENST00000421404 1227 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 MTCO2P23-201ENST00000425216 680 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 RPS12P10-201ENST00000427031 377 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 RPS27AP12-201ENST00000429552 465 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 GTF2IP3-201ENST00000433887 494 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 AL138799.3-201ENST00000438968 350 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 RPL23AP93-201ENST00000440847 484 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 RRM2P4-201ENST00000441721 562 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 MTCYBP42-201ENST00000444653 1130 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 AL031313.1-201ENST00000448435 256 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 NDUFA12P1-201ENST00000455914 406 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 DUXAP8-207ENST00000456786 622 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 UBTFL6-201ENST00000477929 1024 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 AC118282.2-201ENST00000508739 374 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 HIGD1AP3-201ENST00000515857 278 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 DEFB130C-202ENST00000530001 230 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 AC084783.1-201ENST00000565846 910 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 MIR4330-201ENST00000579077 105 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 AC022069.1-201ENST00000582910 658 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 AC010928.3-201ENST00000587712 541 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 AC008687.2-201ENST00000597865 520 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 AC112230.1-201ENST00000604342 547 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 AP004247.3-201ENST00000608682 624 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 DUXAP10-204ENST00000612052 616 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 MIR7703-201ENST00000620784 77 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 AP000346.3-201ENST00000622821 210 ntBASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.18□□□□□ -1.74
NUP54Q7Z3B4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 OR1L1-202ENST00000373686 1083 ntBASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 Y_RNA.578-201ENST00000390903 88 ntBASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 FABP12P1-201ENST00000401911 322 ntBASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 OR51A3P-201ENST00000413596 924 ntBASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 AC069213.2-201ENST00000420238 366 ntBASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 SFR1P2-201ENST00000421841 730 ntBASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 GTF2IP2-201ENST00000424290 697 ntBASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 RPL23AP1-201ENST00000428990 471 ntBASIC4.17□□□□□ -1.74
NUP54Q7Z3B4 AL606517.1-201ENST00000446914 387 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms