Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 HSPA8P1-201ENST00000425843 1833 ntBASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 RNU6-225P-201ENST00000384613 103 ntBASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 AL445189.1-201ENST00000405722 338 ntBASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 AL034374.1-201ENST00000406329 351 ntBASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 MIR1251-201ENST00000408552 70 ntBASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 Z97055.1-201ENST00000419730 712 ntBASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 AC073069.1-201ENST00000428657 441 ntBASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 AC087650.1-201ENST00000431445 468 ntBASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 RPS26P40-201ENST00000435209 294 ntBASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 RPL7P28-201ENST00000437739 740 ntBASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 AL158053.1-201ENST00000441503 453 ntBASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 VN1R25P-201ENST00000443385 738 ntBASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 MOB1AP2-201ENST00000446060 614 ntBASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 VN1R40P-201ENST00000455196 941 ntBASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 RN7SL132P-201ENST00000478131 296 ntBASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 HSPE1P5-201ENST00000561489 272 ntBASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 MIR4458-201ENST00000578872 75 ntBASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 MIR4716-201ENST00000579628 84 ntBASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 MTATP6P2-201ENST00000603319 678 ntBASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 AC079880.2-201ENST00000603790 1213 ntBASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 AC128687.2-201ENST00000609657 566 ntBASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 AL354798.1-201ENST00000622505 329 ntBASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 FP236240.3-201ENST00000623061 327 ntBASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RFWD3Q6PCD5 AL136520.1-201ENST00000600311 1322 ntBASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 RNU6-252P-201ENST00000363232 107 ntBASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 MIR92A2-201ENST00000385299 75 ntBASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 RNU6-1176P-201ENST00000390955 107 ntBASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 RNU2-17P-201ENST00000410290 190 ntBASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 CYCSP19-201ENST00000411715 316 ntBASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 RPL7AP73-201ENST00000413490 353 ntBASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 TCEA1P4-201ENST00000415066 844 ntBASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 AL512661.1-201ENST00000434586 1253 ntBASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 RANP8-201ENST00000444720 713 ntBASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 AC239809.1-201ENST00000450470 217 ntBASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 AC107398.1-201ENST00000486904 505 ntBASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 HIGD1AP18-201ENST00000520730 278 ntBASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 AC019227.1-201ENST00000526902 510 ntBASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 AC034105.4-201ENST00000568304 277 ntBASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 MIR5685-201ENST00000579080 79 ntBASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 AC093227.2-201ENST00000589357 285 ntBASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 MIR8084-201ENST00000614105 89 ntBASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 AP000943.4-201ENST00000622912 357 ntBASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 AC119674.1-212ENST00000641155 993 ntBASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RFWD3Q6PCD5 LINC02471-203ENST00000641941 4752 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms