Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 RNA5SP239-201ENST00000410218 129 ntBASIC5.4□□□□□ -1.54
LONRF3Q496Y0 AC016397.1-201ENST00000412463 242 ntBASIC5.4□□□□□ -1.54
LONRF3Q496Y0 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 RPS12P5-201ENST00000423449 371 ntBASIC5.4□□□□□ -1.54
LONRF3Q496Y0 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 TPT1P13-201ENST00000449760 499 ntBASIC5.4□□□□□ -1.54
LONRF3Q496Y0 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 NDUFA12P1-201ENST00000455914 406 ntBASIC5.4□□□□□ -1.54
LONRF3Q496Y0 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 SNX5P1-201ENST00000505757 1041 ntBASIC5.4□□□□□ -1.54
LONRF3Q496Y0 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 MRPS33P3-201ENST00000513456 322 ntBASIC5.4□□□□□ -1.54
LONRF3Q496Y0 AC087373.1-201ENST00000524920 491 ntBASIC5.4□□□□□ -1.54
LONRF3Q496Y0 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 AC022662.1-201ENST00000580252 331 ntBASIC5.4□□□□□ -1.54
LONRF3Q496Y0 AC015726.1-201ENST00000602353 681 ntBASIC5.4□□□□□ -1.54
LONRF3Q496Y0 AL358072.1-201ENST00000604156 575 ntBASIC5.4□□□□□ -1.54
LONRF3Q496Y0 AC245008.1-201ENST00000608123 476 ntBASIC5.4□□□□□ -1.54
LONRF3Q496Y0 AC105227.2-201ENST00000615075 605 ntBASIC5.4□□□□□ -1.54
LONRF3Q496Y0 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 AC139792.2-201ENST00000624218 587 ntBASIC5.4□□□□□ -1.54
LONRF3Q496Y0 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
LONRF3Q496Y0 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
LONRF3Q496Y0 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
LONRF3Q496Y0 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
LONRF3Q496Y0 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LONRF3Q496Y0 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
LONRF3Q496Y0 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LONRF3Q496Y0 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
LONRF3Q496Y0 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LONRF3Q496Y0 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
LONRF3Q496Y0 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LONRF3Q496Y0 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.39□□□□□ -1.55
LONRF3Q496Y0 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LONRF3Q496Y0 FAM133CP-201ENST00000332869 704 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 NACA3P-201ENST00000359690 648 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 RNU6-356P-201ENST00000384140 107 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 SNORA70E-201ENST00000384492 135 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 AC008280.1-201ENST00000418851 412 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 AC069213.2-201ENST00000420238 366 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 LINC00993-201ENST00000420453 540 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 FABP7P1-201ENST00000424004 391 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 AL365396.1-201ENST00000430854 671 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.39□□□□□ -1.55
LONRF3Q496Y0 COX7BP2-201ENST00000437976 242 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.39□□□□□ -1.55
LONRF3Q496Y0 RPS26P2-201ENST00000440331 348 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 RPL36AP15-201ENST00000444514 266 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LONRF3Q496Y0 AC007327.1-201ENST00000447461 264 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 AC234781.3-201ENST00000452540 973 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 MRPL42P4-201ENST00000453267 443 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 RPL37P6-202ENST00000464216 403 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 RN7SL354P-201ENST00000469282 294 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 GAPDHP39-201ENST00000481866 979 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.39□□□□□ -1.55
LONRF3Q496Y0 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
LONRF3Q496Y0 DYNLL1P6-201ENST00000503440 264 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 AC084024.2-201ENST00000503480 791 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.39□□□□□ -1.55
LONRF3Q496Y0 AC073358.1-201ENST00000505671 684 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 GAPDHP56-201ENST00000506031 988 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.39□□□□□ -1.55
LONRF3Q496Y0 RN7SKP46-201ENST00000515942 234 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 RNU6-1129P-201ENST00000515964 104 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.39□□□□□ -1.55
LONRF3Q496Y0 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.39□□□□□ -1.55
LONRF3Q496Y0 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.39□□□□□ -1.55
LONRF3Q496Y0 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.39□□□□□ -1.55
LONRF3Q496Y0 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5.39□□□□□ -1.55
LONRF3Q496Y0 AGGF1P8-201ENST00000562979 1000 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 DPRXP5-201ENST00000604662 539 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 AC018638.7-201ENST00000605836 1114 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 AP001521.2-201ENST00000608772 546 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LONRF3Q496Y0 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
LONRF3Q496Y0 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 AP000346.3-201ENST00000622821 210 ntBASIC5.39□□□□□ -1.55
LONRF3Q496Y0 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC5.39□□□□□ -1.55
LONRF3Q496Y0 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.39□□□□□ -1.55
LONRF3Q496Y0 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.39□□□□□ -1.55
LONRF3Q496Y0 MIR4496-201ENST00000635896 61 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms