Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 NPM1P11-201ENST00000417106 855 ntBASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 OR4F13P-201ENST00000428478 931 ntBASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 USP9YP9-201ENST00000429406 715 ntBASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 MTCO2P7-201ENST00000446518 666 ntBASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 RPL36AP33-201ENST00000450395 310 ntBASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 MEMO1P3-201ENST00000459811 302 ntBASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 RAP1BP2-201ENST00000478270 544 ntBASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 RN7SL814P-201ENST00000487715 300 ntBASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 RNU6-150P-201ENST00000516237 95 ntBASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 AC008033.2-201ENST00000542626 177 ntBASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 AC092470.1-201ENST00000546187 132 ntBASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 PCMTD1P2-201ENST00000565017 355 ntBASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 AC011260.1-201ENST00000578420 472 ntBASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 MIR4330-201ENST00000579077 105 ntBASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 AC012360.2-201ENST00000609349 391 ntBASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 AL596275.2-204ENST00000641628 552 ntBASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 AL596275.2-206ENST00000641957 626 ntBASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 SNORA26.8-201ENST00000391306 124 ntBASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 ARF4P3-201ENST00000397387 509 ntBASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 TPMTP3-201ENST00000411928 735 ntBASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 RPL7P8-201ENST00000411964 730 ntBASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 FAR2P2-201ENST00000413041 594 ntBASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 OR2AM1P-201ENST00000422137 422 ntBASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 DDX39BP1-205ENST00000422507 192 ntBASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 FAR2P4-202ENST00000425399 584 ntBASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 AC124944.2-201ENST00000429866 1242 ntBASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 VN1R108P-201ENST00000431580 830 ntBASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 RHOT1P3-201ENST00000436571 331 ntBASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 RPS29P33-201ENST00000456717 146 ntBASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 AC109486.1-201ENST00000486833 374 ntBASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 OR2A20P-203ENST00000498397 1268 ntBASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 AC006499.5-201ENST00000505037 514 ntBASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 AC104986.1-201ENST00000517978 436 ntBASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 AC023161.2-201ENST00000551218 780 ntBASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 RPL23AP92-201ENST00000603609 255 ntBASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 AL513477.2-201ENST00000607858 568 ntBASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 AL356596.1-201ENST00000624230 379 ntBASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 AP003400.3-201ENST00000624904 346 ntBASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 CYP3A51P-201ENST00000633513 256 ntBASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 MIR4496-201ENST00000635896 61 ntBASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 AC135068.12-201ENST00000637370 931 ntBASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CCDC144BQ3MJ40 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.9□□□□□ -1.47
CCDC144BQ3MJ40 AC097504.1-201ENST00000515103 2415 ntBASIC5.9□□□□□ -1.47
CCDC144BQ3MJ40 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.9□□□□□ -1.47
CCDC144BQ3MJ40 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms