Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDH1Q08174 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDH1Q08174 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDH1Q08174 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
PCDH1Q08174 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDH1Q08174 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDH1Q08174 AC092447.10-201ENST00000620607 1652 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDH1Q08174 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDH1Q08174 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
PCDH1Q08174 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDH1Q08174 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDH1Q08174 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
PCDH1Q08174 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
PCDH1Q08174 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCDH1Q08174 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDH1Q08174 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCDH1Q08174 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDH1Q08174 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
PCDH1Q08174 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
PCDH1Q08174 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
PCDH1Q08174 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDH1Q08174 Y_RNA.128-201ENST00000363391 112 ntBASIC5.87□□□□□ -1.47
PCDH1Q08174 Y_RNA.216-201ENST00000364205 93 ntBASIC5.87□□□□□ -1.47
PCDH1Q08174 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCDH1Q08174 Y_RNA.387-201ENST00000383918 102 ntBASIC5.87□□□□□ -1.47
PCDH1Q08174 AC016769.3-201ENST00000396562 315 ntBASIC5.87□□□□□ -1.47
PCDH1Q08174 RPL31P52-201ENST00000407532 367 ntBASIC5.87□□□□□ -1.47
PCDH1Q08174 AL023807.1-201ENST00000407932 359 ntBASIC5.87□□□□□ -1.47
PCDH1Q08174 SNORA11.3-201ENST00000408471 128 ntBASIC5.87□□□□□ -1.47
PCDH1Q08174 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.87□□□□□ -1.47
PCDH1Q08174 MTCYBP8-201ENST00000422855 651 ntBASIC5.87□□□□□ -1.47
PCDH1Q08174 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.87□□□□□ -1.47
PCDH1Q08174 RPSAP65-201ENST00000429660 595 ntBASIC5.87□□□□□ -1.47
PCDH1Q08174 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.87□□□□□ -1.47
PCDH1Q08174 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCDH1Q08174 AC079781.2-201ENST00000446424 169 ntBASIC5.87□□□□□ -1.47
PCDH1Q08174 RN7SL168P-201ENST00000463821 279 ntBASIC5.87□□□□□ -1.47
PCDH1Q08174 AC130509.1-201ENST00000464158 433 ntBASIC5.87□□□□□ -1.47
PCDH1Q08174 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDH1Q08174 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.87□□□□□ -1.47
PCDH1Q08174 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
PCDH1Q08174 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.87□□□□□ -1.47
PCDH1Q08174 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.87□□□□□ -1.47
PCDH1Q08174 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDH1Q08174 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.87□□□□□ -1.47
PCDH1Q08174 HAUS8P1-201ENST00000549005 542 ntBASIC5.87□□□□□ -1.47
PCDH1Q08174 OR4T1P-201ENST00000554933 911 ntBASIC5.87□□□□□ -1.47
PCDH1Q08174 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.87□□□□□ -1.47
PCDH1Q08174 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCDH1Q08174 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDH1Q08174 AC098848.2-201ENST00000588023 330 ntBASIC5.87□□□□□ -1.47
PCDH1Q08174 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.87□□□□□ -1.47
PCDH1Q08174 AC006115.2-201ENST00000596823 202 ntBASIC5.87□□□□□ -1.47
PCDH1Q08174 AC093388.1-201ENST00000609166 430 ntBASIC5.87□□□□□ -1.47
PCDH1Q08174 AL355472.4-201ENST00000610233 626 ntBASIC5.87□□□□□ -1.47
PCDH1Q08174 SNORA11.6-201ENST00000619030 128 ntBASIC5.87□□□□□ -1.47
PCDH1Q08174 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDH1Q08174 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.87□□□□□ -1.47
PCDH1Q08174 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDH1Q08174 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCDH1Q08174 AC107081.3-201ENST00000612715 2034 ntBASIC5.87□□□□□ -1.47
PCDH1Q08174 AC024587.1-201ENST00000505925 2157 ntBASIC5.87□□□□□ -1.47
PCDH1Q08174 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDH1Q08174 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PCDH1Q08174 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.87□□□□□ -1.47
PCDH1Q08174 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
PCDH1Q08174 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDH1Q08174 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDH1Q08174 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDH1Q08174 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDH1Q08174 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDH1Q08174 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDH1Q08174 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDH1Q08174 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDH1Q08174 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PCDH1Q08174 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
PCDH1Q08174 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDH1Q08174 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDH1Q08174 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDH1Q08174 AL161781.1-201ENST00000354277 403 ntBASIC5.86□□□□□ -1.47
PCDH1Q08174 SNORA4.3-201ENST00000365564 137 ntBASIC5.86□□□□□ -1.47
PCDH1Q08174 Y_RNA.422-201ENST00000384054 114 ntBASIC5.86□□□□□ -1.47
PCDH1Q08174 RNU11-201ENST00000387069 134 ntBASIC5.86□□□□□ -1.47
PCDH1Q08174 AL096829.1-201ENST00000413677 457 ntBASIC5.86□□□□□ -1.47
PCDH1Q08174 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDH1Q08174 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDH1Q08174 RPL35AP31-201ENST00000418340 337 ntBASIC5.86□□□□□ -1.47
PCDH1Q08174 RPS15AP12-201ENST00000419498 388 ntBASIC5.86□□□□□ -1.47
PCDH1Q08174 AC130360.1-201ENST00000425489 1117 ntBASIC5.86□□□□□ -1.47
PCDH1Q08174 GPM6BP2-201ENST00000432046 144 ntBASIC5.86□□□□□ -1.47
PCDH1Q08174 HSPE1P28-201ENST00000443139 211 ntBASIC5.86□□□□□ -1.47
PCDH1Q08174 GPM6BP1-201ENST00000446387 144 ntBASIC5.86□□□□□ -1.47
PCDH1Q08174 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.86□□□□□ -1.47
PCDH1Q08174 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDH1Q08174 AC002553.3-201ENST00000453002 341 ntBASIC5.86□□□□□ -1.47
PCDH1Q08174 AL356010.1-201ENST00000456364 102 ntBASIC5.86□□□□□ -1.47
PCDH1Q08174 RNU6-329P-201ENST00000459618 107 ntBASIC5.86□□□□□ -1.47
PCDH1Q08174 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDH1Q08174 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms