Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.01□□□□□ -1.45
SOX4Q06945 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX4Q06945 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX4Q06945 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SOX4Q06945 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX4Q06945 AC122134.1-201ENST00000565664 1104 ntBASIC6.01□□□□□ -1.45
SOX4Q06945 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC6.01□□□□□ -1.45
SOX4Q06945 AC055876.1-202ENST00000567053 138 ntBASIC6.01□□□□□ -1.45
SOX4Q06945 AC113139.1-201ENST00000605049 239 ntBASIC6.01□□□□□ -1.45
SOX4Q06945 AL355802.3-201ENST00000607571 545 ntBASIC6.01□□□□□ -1.45
SOX4Q06945 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SOX4Q06945 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.01□□□□□ -1.45
SOX4Q06945 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC6.01□□□□□ -1.45
SOX4Q06945 AC138649.5-201ENST00000637456 137 ntBASIC6.01□□□□□ -1.45
SOX4Q06945 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.01□□□□□ -1.45
SOX4Q06945 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX4Q06945 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
SOX4Q06945 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX4Q06945 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.01□□□□□ -1.45
SOX4Q06945 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.01□□□□□ -1.45
SOX4Q06945 MTND5P23-201ENST00000430812 1655 ntBASIC6.01□□□□□ -1.45
SOX4Q06945 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.01□□□□□ -1.45
SOX4Q06945 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6□□□□□ -1.45
SOX4Q06945 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6□□□□□ -1.45
SOX4Q06945 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SOX4Q06945 AP000473.2-201ENST00000602659 1537 ntBASIC6□□□□□ -1.45
SOX4Q06945 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
SOX4Q06945 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6□□□□□ -1.45
SOX4Q06945 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SOX4Q06945 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
SOX4Q06945 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
SOX4Q06945 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6□□□□□ -1.45
SOX4Q06945 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SOX4Q06945 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6□□□□□ -1.45
SOX4Q06945 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6□□□□□ -1.45
SOX4Q06945 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SOX4Q06945 RNA5SP319-201ENST00000362768 119 ntBASIC6□□□□□ -1.45
SOX4Q06945 RNU6-115P-201ENST00000364310 107 ntBASIC6□□□□□ -1.45
SOX4Q06945 RNU6-359P-201ENST00000365466 108 ntBASIC6□□□□□ -1.45
SOX4Q06945 RNU1-39P-201ENST00000383897 165 ntBASIC6□□□□□ -1.45
SOX4Q06945 SNORA16A-201ENST00000384342 137 ntBASIC6□□□□□ -1.45
SOX4Q06945 AC005042.1-201ENST00000393397 800 ntBASIC6□□□□□ -1.45
SOX4Q06945 OR4K12P-201ENST00000406538 961 ntBASIC6□□□□□ -1.45
SOX4Q06945 RN7SKP266-201ENST00000410232 287 ntBASIC6□□□□□ -1.45
SOX4Q06945 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6□□□□□ -1.45
SOX4Q06945 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6□□□□□ -1.45
SOX4Q06945 COX6CP17-201ENST00000421389 185 ntBASIC6□□□□□ -1.45
SOX4Q06945 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6□□□□□ -1.45
SOX4Q06945 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6□□□□□ -1.45
SOX4Q06945 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC6□□□□□ -1.45
SOX4Q06945 CYCSP12-201ENST00000437729 300 ntBASIC6□□□□□ -1.45
SOX4Q06945 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC6□□□□□ -1.45
SOX4Q06945 RN7SL583P-201ENST00000475692 287 ntBASIC6□□□□□ -1.45
SOX4Q06945 PPP1R11P1-201ENST00000486095 376 ntBASIC6□□□□□ -1.45
SOX4Q06945 AC013356.1-201ENST00000489027 564 ntBASIC6□□□□□ -1.45
SOX4Q06945 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC6□□□□□ -1.45
SOX4Q06945 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC6□□□□□ -1.45
SOX4Q06945 AC103851.1-201ENST00000506833 274 ntBASIC6□□□□□ -1.45
SOX4Q06945 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6□□□□□ -1.45
SOX4Q06945 RNU6-835P-201ENST00000516974 104 ntBASIC6□□□□□ -1.45
SOX4Q06945 HIGD1AP6-201ENST00000521833 279 ntBASIC6□□□□□ -1.45
SOX4Q06945 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC6□□□□□ -1.45
SOX4Q06945 AP003181.2-201ENST00000528941 181 ntBASIC6□□□□□ -1.45
SOX4Q06945 AC137627.1-201ENST00000545761 289 ntBASIC6□□□□□ -1.45
SOX4Q06945 AC093012.1-202ENST00000549403 582 ntBASIC6□□□□□ -1.45
SOX4Q06945 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC6□□□□□ -1.45
SOX4Q06945 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6□□□□□ -1.45
SOX4Q06945 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6□□□□□ -1.45
SOX4Q06945 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6□□□□□ -1.45
SOX4Q06945 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6□□□□□ -1.45
SOX4Q06945 AC124312.5-201ENST00000604451 268 ntBASIC6□□□□□ -1.45
SOX4Q06945 AC009027.1-201ENST00000604510 479 ntBASIC6□□□□□ -1.45
SOX4Q06945 NANOGP3-201ENST00000605855 286 ntBASIC6□□□□□ -1.45
SOX4Q06945 AP001521.1-201ENST00000609150 300 ntBASIC6□□□□□ -1.45
SOX4Q06945 AL133215.3-201ENST00000609801 448 ntBASIC6□□□□□ -1.45
SOX4Q06945 AC105429.2-201ENST00000610567 517 ntBASIC6□□□□□ -1.45
SOX4Q06945 uc_338.5-201ENST00000611839 155 ntBASIC6□□□□□ -1.45
SOX4Q06945 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6□□□□□ -1.45
SOX4Q06945 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6□□□□□ -1.45
SOX4Q06945 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
SOX4Q06945 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6□□□□□ -1.45
SOX4Q06945 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6□□□□□ -1.45
SOX4Q06945 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SOX4Q06945 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6□□□□□ -1.45
SOX4Q06945 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SOX4Q06945 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SOX4Q06945 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SOX4Q06945 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SOX4Q06945 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
SOX4Q06945 AL359955.1-201ENST00000455242 3275 ntBASIC6□□□□□ -1.45
SOX4Q06945 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6□□□□□ -1.45
SOX4Q06945 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.99□□□□□ -1.45
SOX4Q06945 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SOX4Q06945 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.99□□□□□ -1.45
SOX4Q06945 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SOX4Q06945 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.99□□□□□ -1.45
SOX4Q06945 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
SOX4Q06945 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
SOX4Q06945 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
SOX4Q06945 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms