Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.19□□□□□ -1.74
SCN7AQ01118 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.19□□□□□ -1.74
SCN7AQ01118 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
SCN7AQ01118 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SCN7AQ01118 AC004944.1-201ENST00000517807 3059 ntBASIC4.18□□□□□ -1.74
SCN7AQ01118 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SCN7AQ01118 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
SCN7AQ01118 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SCN7AQ01118 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SCN7AQ01118 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SCN7AQ01118 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.18□□□□□ -1.74
SCN7AQ01118 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SCN7AQ01118 RNU6-283P-201ENST00000364788 107 ntBASIC4.18□□□□□ -1.74
SCN7AQ01118 HMGN2P8-201ENST00000391458 268 ntBASIC4.18□□□□□ -1.74
SCN7AQ01118 HSPE1P8-201ENST00000406997 288 ntBASIC4.18□□□□□ -1.74
SCN7AQ01118 HMGN1P24-201ENST00000412282 298 ntBASIC4.18□□□□□ -1.74
SCN7AQ01118 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.18□□□□□ -1.74
SCN7AQ01118 AC006989.1-201ENST00000427212 131 ntBASIC4.18□□□□□ -1.74
SCN7AQ01118 RPS26P47-201ENST00000427219 348 ntBASIC4.18□□□□□ -1.74
SCN7AQ01118 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.18□□□□□ -1.74
SCN7AQ01118 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC4.18□□□□□ -1.74
SCN7AQ01118 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.18□□□□□ -1.74
SCN7AQ01118 S100A11P2-201ENST00000467589 312 ntBASIC4.18□□□□□ -1.74
SCN7AQ01118 RPS26P3-201ENST00000470205 348 ntBASIC4.18□□□□□ -1.74
SCN7AQ01118 AC004057.1-201ENST00000485827 348 ntBASIC4.18□□□□□ -1.74
SCN7AQ01118 AC021678.1-201ENST00000505195 936 ntBASIC4.18□□□□□ -1.74
SCN7AQ01118 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.18□□□□□ -1.74
SCN7AQ01118 AL121603.1-201ENST00000553815 142 ntBASIC4.18□□□□□ -1.74
SCN7AQ01118 AP005205.1-201ENST00000563503 508 ntBASIC4.18□□□□□ -1.74
SCN7AQ01118 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.18□□□□□ -1.74
SCN7AQ01118 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SCN7AQ01118 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SCN7AQ01118 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SCN7AQ01118 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SCN7AQ01118 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SCN7AQ01118 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.17□□□□□ -1.74
SCN7AQ01118 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.17□□□□□ -1.74
SCN7AQ01118 AC074367.1-201ENST00000438685 1125 ntBASIC4.17□□□□□ -1.74
SCN7AQ01118 RPL7P48-201ENST00000461513 746 ntBASIC4.17□□□□□ -1.74
SCN7AQ01118 AC026333.2-201ENST00000542164 106 ntBASIC4.17□□□□□ -1.74
SCN7AQ01118 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.17□□□□□ -1.74
SCN7AQ01118 AC100793.4-201ENST00000613683 429 ntBASIC4.17□□□□□ -1.74
SCN7AQ01118 AL157817.1-201ENST00000614264 790 ntBASIC4.17□□□□□ -1.74
SCN7AQ01118 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.17□□□□□ -1.74
SCN7AQ01118 AC119674.1-212ENST00000641155 993 ntBASIC4.17□□□□□ -1.74
SCN7AQ01118 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
SCN7AQ01118 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SCN7AQ01118 ZNF807-201ENST00000328088 1707 ntBASIC4.17□□□□□ -1.74
SCN7AQ01118 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.17□□□□□ -1.74
SCN7AQ01118 AL353678.1-201ENST00000422735 741 ntBASIC4.16□□□□□ -1.74
SCN7AQ01118 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
SCN7AQ01118 AL139132.1-201ENST00000431587 344 ntBASIC4.16□□□□□ -1.74
SCN7AQ01118 AC107083.1-201ENST00000439643 279 ntBASIC4.16□□□□□ -1.74
SCN7AQ01118 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.16□□□□□ -1.74
SCN7AQ01118 AC011825.1-201ENST00000484967 388 ntBASIC4.16□□□□□ -1.74
SCN7AQ01118 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.16□□□□□ -1.74
SCN7AQ01118 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.16□□□□□ -1.74
SCN7AQ01118 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.16□□□□□ -1.74
SCN7AQ01118 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.16□□□□□ -1.74
SCN7AQ01118 CR383656.14-201ENST00000551951 406 ntBASIC4.16□□□□□ -1.74
SCN7AQ01118 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.16□□□□□ -1.74
SCN7AQ01118 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.16□□□□□ -1.74
SCN7AQ01118 AC005242.1-201ENST00000585658 438 ntBASIC4.16□□□□□ -1.74
SCN7AQ01118 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.16□□□□□ -1.74
SCN7AQ01118 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.16□□□□□ -1.74
SCN7AQ01118 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SCN7AQ01118 AC073073.2-201ENST00000609827 2578 ntBASIC4.16□□□□□ -1.74
SCN7AQ01118 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
SCN7AQ01118 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.16□□□□□ -1.74
SCN7AQ01118 AC068647.1-201ENST00000489539 2265 ntBASIC4.16□□□□□ -1.74
SCN7AQ01118 NCAPGP1-201ENST00000505112 1814 ntBASIC4.16□□□□□ -1.74
SCN7AQ01118 AL513302.2-201ENST00000562313 1842 ntBASIC4.16□□□□□ -1.74
SCN7AQ01118 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
SCN7AQ01118 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SCN7AQ01118 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.16□□□□□ -1.74
SCN7AQ01118 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SCN7AQ01118 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.16□□□□□ -1.74
SCN7AQ01118 RNU4-47P-201ENST00000410876 114 ntBASIC4.16□□□□□ -1.74
SCN7AQ01118 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SCN7AQ01118 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.16□□□□□ -1.74
SCN7AQ01118 SYT14P1-201ENST00000481459 721 ntBASIC4.16□□□□□ -1.74
SCN7AQ01118 FCF1P3-201ENST00000496394 590 ntBASIC4.16□□□□□ -1.74
SCN7AQ01118 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.16□□□□□ -1.74
SCN7AQ01118 AC008885.1-201ENST00000514930 301 ntBASIC4.16□□□□□ -1.74
SCN7AQ01118 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.16□□□□□ -1.74
SCN7AQ01118 AL390334.1-201ENST00000556395 450 ntBASIC4.16□□□□□ -1.74
SCN7AQ01118 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.16□□□□□ -1.74
SCN7AQ01118 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.16□□□□□ -1.74
SCN7AQ01118 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.16□□□□□ -1.74
SCN7AQ01118 AC116312.1-201ENST00000606841 314 ntBASIC4.16□□□□□ -1.74
SCN7AQ01118 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
SCN7AQ01118 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SCN7AQ01118 FAM35DP-201ENST00000323387 2712 ntBASIC4.15□□□□□ -1.74
SCN7AQ01118 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.15□□□□□ -1.74
SCN7AQ01118 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.15□□□□□ -1.74
SCN7AQ01118 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.74
SCN7AQ01118 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.15□□□□□ -1.74
SCN7AQ01118 SAGE4P-201ENST00000442271 3381 ntBASIC4.15□□□□□ -1.75
SCN7AQ01118 CR381670.1-201ENST00000624291 1693 ntBASIC4.15□□□□□ -1.75
SCN7AQ01118 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms