Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AL356490.1-201ENST00000623079 479 ntBASIC2.25□□□□□ -2.05
RPL39P62891 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC2.25□□□□□ -2.05
RPL39P62891 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RPL39P62891 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RPL39P62891 AL450326.2-201ENST00000421913 1962 ntBASIC2.25□□□□□ -2.05
RPL39P62891 AL353743.1-202ENST00000431724 1695 ntBASIC2.25□□□□□ -2.05
RPL39P62891 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
RPL39P62891 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.24□□□□□ -2.05
RPL39P62891 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
RPL39P62891 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC2.24□□□□□ -2.05
RPL39P62891 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
RPL39P62891 SNORA51.4-201ENST00000364993 124 ntBASIC2.24□□□□□ -2.05
RPL39P62891 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
RPL39P62891 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
RPL39P62891 RN7SKP111-201ENST00000410349 271 ntBASIC2.24□□□□□ -2.05
RPL39P62891 RN7SKP177-201ENST00000410567 355 ntBASIC2.24□□□□□ -2.05
RPL39P62891 BMS1P22-201ENST00000414726 313 ntBASIC2.24□□□□□ -2.05
RPL39P62891 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
RPL39P62891 CYCSP4-201ENST00000429682 331 ntBASIC2.24□□□□□ -2.05
RPL39P62891 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC2.24□□□□□ -2.05
RPL39P62891 ATP5C1P1-201ENST00000441945 895 ntBASIC2.24□□□□□ -2.05
RPL39P62891 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
RPL39P62891 CEACAMP4-201ENST00000457676 421 ntBASIC2.24□□□□□ -2.05
RPL39P62891 RPL7P38-201ENST00000488396 739 ntBASIC2.24□□□□□ -2.05
RPL39P62891 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
RPL39P62891 POU5F1P7-201ENST00000508759 541 ntBASIC2.24□□□□□ -2.05
RPL39P62891 AC147055.1-201ENST00000509261 750 ntBASIC2.24□□□□□ -2.05
RPL39P62891 HPRT1P1-201ENST00000509498 657 ntBASIC2.24□□□□□ -2.05
RPL39P62891 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.24□□□□□ -2.05
RPL39P62891 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC2.24□□□□□ -2.05
RPL39P62891 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.24□□□□□ -2.05
RPL39P62891 RN7SKP13-201ENST00000515933 244 ntBASIC2.24□□□□□ -2.05
RPL39P62891 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC2.24□□□□□ -2.05
RPL39P62891 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.24□□□□□ -2.05
RPL39P62891 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC2.24□□□□□ -2.05
RPL39P62891 AC092868.3-201ENST00000560515 784 ntBASIC2.24□□□□□ -2.05
RPL39P62891 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.24□□□□□ -2.05
RPL39P62891 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC2.24□□□□□ -2.05
RPL39P62891 AL023583.1-201ENST00000607518 1143 ntBASIC2.24□□□□□ -2.05
RPL39P62891 AC099669.2-201ENST00000616549 437 ntBASIC2.24□□□□□ -2.05
RPL39P62891 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.24□□□□□ -2.05
RPL39P62891 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.24□□□□□ -2.05
RPL39P62891 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.24□□□□□ -2.05
RPL39P62891 AL365440.1-201ENST00000436135 2167 ntBASIC2.24□□□□□ -2.05
RPL39P62891 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.24□□□□□ -2.05
RPL39P62891 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
RPL39P62891 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
RPL39P62891 BX005019.1-201ENST00000561881 1810 ntBASIC2.24□□□□□ -2.05
RPL39P62891 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
RPL39P62891 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RPL39P62891 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RPL39P62891 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RPL39P62891 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.23□□□□□ -2.05
RPL39P62891 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
RPL39P62891 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RPL39P62891 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
RPL39P62891 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RPL39P62891 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RPL39P62891 RPL23AP57-201ENST00000332361 466 ntBASIC2.23□□□□□ -2.05
RPL39P62891 RPL21P17-201ENST00000397467 475 ntBASIC2.23□□□□□ -2.05
RPL39P62891 RPL23AP69-201ENST00000431134 458 ntBASIC2.23□□□□□ -2.05
RPL39P62891 USP9YP31-201ENST00000431405 881 ntBASIC2.23□□□□□ -2.05
RPL39P62891 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RPL39P62891 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.23□□□□□ -2.05
RPL39P62891 RPS15AP29-201ENST00000445539 400 ntBASIC2.23□□□□□ -2.05
RPL39P62891 MTND6P5-201ENST00000448266 512 ntBASIC2.23□□□□□ -2.05
RPL39P62891 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC2.23□□□□□ -2.05
RPL39P62891 AC093663.1-201ENST00000497190 394 ntBASIC2.23□□□□□ -2.05
RPL39P62891 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.23□□□□□ -2.05
RPL39P62891 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.23□□□□□ -2.05
RPL39P62891 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC2.23□□□□□ -2.05
RPL39P62891 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC2.23□□□□□ -2.05
RPL39P62891 NPM1P41-201ENST00000512920 831 ntBASIC2.23□□□□□ -2.05
RPL39P62891 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.23□□□□□ -2.05
RPL39P62891 SNORA70.17-201ENST00000516449 133 ntBASIC2.23□□□□□ -2.05
RPL39P62891 VTA1P2-201ENST00000520205 911 ntBASIC2.23□□□□□ -2.05
RPL39P62891 OR4C2P-201ENST00000530855 1064 ntBASIC2.23□□□□□ -2.05
RPL39P62891 GTF2IP22-201ENST00000554443 182 ntBASIC2.23□□□□□ -2.05
RPL39P62891 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.23□□□□□ -2.05
RPL39P62891 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.23□□□□□ -2.05
RPL39P62891 AC055876.1-202ENST00000567053 138 ntBASIC2.23□□□□□ -2.05
RPL39P62891 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC2.23□□□□□ -2.05
RPL39P62891 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.23□□□□□ -2.05
RPL39P62891 AL354976.1-201ENST00000613843 387 ntBASIC2.23□□□□□ -2.05
RPL39P62891 AL157817.1-201ENST00000614264 790 ntBASIC2.23□□□□□ -2.05
RPL39P62891 AC006840.1-201ENST00000623069 542 ntBASIC2.23□□□□□ -2.05
RPL39P62891 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.23□□□□□ -2.05
RPL39P62891 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC2.23□□□□□ -2.05
RPL39P62891 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.23□□□□□ -2.05
RPL39P62891 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RPL39P62891 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC2.23□□□□□ -2.05
RPL39P62891 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RPL39P62891 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC2.22□□□□□ -2.05
RPL39P62891 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RPL39P62891 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RPL39P62891 DYNLT3P1-201ENST00000378574 347 ntBASIC2.22□□□□□ -2.05
RPL39P62891 AL359837.1-201ENST00000381357 287 ntBASIC2.22□□□□□ -2.05
RPL39P62891 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC2.22□□□□□ -2.05
RPL39P62891 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.22□□□□□ -2.05
RPL39P62891 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms