Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 SNORD74.4-201ENST00000364129 80 ntBASIC3.79□□□□□ -1.8
RPS4XP62701 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
RPS4XP62701 RNU6-1176P-201ENST00000390955 107 ntBASIC3.79□□□□□ -1.8
RPS4XP62701 ATP5F1P2-201ENST00000398143 760 ntBASIC3.79□□□□□ -1.8
RPS4XP62701 AL022722.2-201ENST00000402519 180 ntBASIC3.79□□□□□ -1.8
RPS4XP62701 LAP3P1-201ENST00000403648 294 ntBASIC3.79□□□□□ -1.8
RPS4XP62701 RN7SKP235-201ENST00000410662 305 ntBASIC3.79□□□□□ -1.8
RPS4XP62701 RNU6-628P-201ENST00000410675 107 ntBASIC3.79□□□□□ -1.8
RPS4XP62701 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.79□□□□□ -1.8
RPS4XP62701 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.79□□□□□ -1.8
RPS4XP62701 MFSD13B-201ENST00000420133 1290 ntBASIC3.79□□□□□ -1.8
RPS4XP62701 AC004865.1-201ENST00000442276 1003 ntBASIC3.79□□□□□ -1.8
RPS4XP62701 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.79□□□□□ -1.8
RPS4XP62701 AC233982.1-201ENST00000451247 436 ntBASIC3.79□□□□□ -1.8
RPS4XP62701 RNU7-140P-201ENST00000459546 60 ntBASIC3.79□□□□□ -1.8
RPS4XP62701 RPS7P7-201ENST00000463499 571 ntBASIC3.79□□□□□ -1.8
RPS4XP62701 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.79□□□□□ -1.8
RPS4XP62701 RPS27P23-201ENST00000487608 251 ntBASIC3.79□□□□□ -1.8
RPS4XP62701 RPL35P6-201ENST00000490024 372 ntBASIC3.79□□□□□ -1.8
RPS4XP62701 AC090071.1-201ENST00000507713 644 ntBASIC3.79□□□□□ -1.8
RPS4XP62701 AC108475.1-201ENST00000507880 950 ntBASIC3.79□□□□□ -1.8
RPS4XP62701 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.79□□□□□ -1.8
RPS4XP62701 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.79□□□□□ -1.8
RPS4XP62701 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.79□□□□□ -1.8
RPS4XP62701 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.79□□□□□ -1.8
RPS4XP62701 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RPS4XP62701 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.79□□□□□ -1.8
RPS4XP62701 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.79□□□□□ -1.8
RPS4XP62701 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.79□□□□□ -1.8
RPS4XP62701 CYB5AP5-201ENST00000549779 389 ntBASIC3.79□□□□□ -1.8
RPS4XP62701 AC063950.1-201ENST00000552036 308 ntBASIC3.79□□□□□ -1.8
RPS4XP62701 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.79□□□□□ -1.8
RPS4XP62701 SERPINE4P-201ENST00000554978 281 ntBASIC3.79□□□□□ -1.8
RPS4XP62701 HMGB3P26-201ENST00000560051 582 ntBASIC3.79□□□□□ -1.8
RPS4XP62701 AC007599.1-201ENST00000568688 1174 ntBASIC3.79□□□□□ -1.8
RPS4XP62701 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.79□□□□□ -1.8
RPS4XP62701 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.79□□□□□ -1.8
RPS4XP62701 AL109618.2-201ENST00000605527 211 ntBASIC3.79□□□□□ -1.8
RPS4XP62701 AP002802.2-201ENST00000605877 235 ntBASIC3.79□□□□□ -1.8
RPS4XP62701 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.79□□□□□ -1.8
RPS4XP62701 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.79□□□□□ -1.8
RPS4XP62701 AL359535.1-201ENST00000612100 1087 ntBASIC3.79□□□□□ -1.8
RPS4XP62701 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.79□□□□□ -1.8
RPS4XP62701 AC022079.2-201ENST00000619739 566 ntBASIC3.79□□□□□ -1.8
RPS4XP62701 AL023881.1-201ENST00000621088 301 ntBASIC3.79□□□□□ -1.8
RPS4XP62701 AL121594.5-201ENST00000631724 573 ntBASIC3.79□□□□□ -1.8
RPS4XP62701 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.79□□□□□ -1.8
RPS4XP62701 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RPS4XP62701 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RPS4XP62701 MAPK10-253ENST00000641010 4072 ntBASIC3.79□□□□□ -1.8
RPS4XP62701 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RPS4XP62701 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RPS4XP62701 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RPS4XP62701 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
RPS4XP62701 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RPS4XP62701 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
RPS4XP62701 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
RPS4XP62701 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
RPS4XP62701 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RPS4XP62701 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.78□□□□□ -1.8
RPS4XP62701 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
RPS4XP62701 RNU6-353P-201ENST00000364266 108 ntBASIC3.78□□□□□ -1.8
RPS4XP62701 AC012497.1-201ENST00000429392 575 ntBASIC3.78□□□□□ -1.8
RPS4XP62701 AL645931.1-201ENST00000439737 410 ntBASIC3.78□□□□□ -1.8
RPS4XP62701 AL592437.1-201ENST00000443781 492 ntBASIC3.78□□□□□ -1.8
RPS4XP62701 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.78□□□□□ -1.8
RPS4XP62701 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.78□□□□□ -1.8
RPS4XP62701 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.78□□□□□ -1.8
RPS4XP62701 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.78□□□□□ -1.8
RPS4XP62701 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.78□□□□□ -1.8
RPS4XP62701 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.78□□□□□ -1.8
RPS4XP62701 RPS29P19-201ENST00000479709 171 ntBASIC3.78□□□□□ -1.8
RPS4XP62701 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.78□□□□□ -1.8
RPS4XP62701 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.78□□□□□ -1.8
RPS4XP62701 MTND3P3-201ENST00000505004 126 ntBASIC3.78□□□□□ -1.8
RPS4XP62701 AC005351.1-201ENST00000511152 786 ntBASIC3.78□□□□□ -1.8
RPS4XP62701 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.78□□□□□ -1.8
RPS4XP62701 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.78□□□□□ -1.8
RPS4XP62701 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.78□□□□□ -1.8
RPS4XP62701 AF279873.1-201ENST00000523393 313 ntBASIC3.78□□□□□ -1.8
RPS4XP62701 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.78□□□□□ -1.8
RPS4XP62701 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.78□□□□□ -1.8
RPS4XP62701 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.78□□□□□ -1.8
RPS4XP62701 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.78□□□□□ -1.8
RPS4XP62701 AC025884.1-201ENST00000556034 378 ntBASIC3.78□□□□□ -1.8
RPS4XP62701 AGGF1P6-201ENST00000569213 976 ntBASIC3.78□□□□□ -1.8
RPS4XP62701 MTCO1P40-201ENST00000574371 625 ntBASIC3.78□□□□□ -1.8
RPS4XP62701 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RPS4XP62701 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.78□□□□□ -1.8
RPS4XP62701 LINC00901.1-201ENST00000617252 152 ntBASIC3.78□□□□□ -1.8
RPS4XP62701 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RPS4XP62701 AP005264.7-201ENST00000625003 745 ntBASIC3.78□□□□□ -1.8
RPS4XP62701 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.78□□□□□ -1.8
RPS4XP62701 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.78□□□□□ -1.8
RPS4XP62701 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.78□□□□□ -1.8
RPS4XP62701 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.78□□□□□ -1.8
RPS4XP62701 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
RPS4XP62701 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.78□□□□□ -1.8
RPS4XP62701 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.78□□□□□ -1.8
RPS4XP62701 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms