Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VBP1P61758 MIR6861-201ENST00000618657 64 ntBASIC3.3□□□□□ -1.88
VBP1P61758 AC015726.3-201ENST00000624501 418 ntBASIC3.3□□□□□ -1.88
VBP1P61758 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.3□□□□□ -1.88
VBP1P61758 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.3□□□□□ -1.88
VBP1P61758 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
VBP1P61758 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VBP1P61758 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.29□□□□□ -1.88
VBP1P61758 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.29□□□□□ -1.88
VBP1P61758 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.29□□□□□ -1.88
VBP1P61758 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VBP1P61758 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VBP1P61758 EIF5P1-201ENST00000400019 1231 ntBASIC3.29□□□□□ -1.88
VBP1P61758 AL354719.1-201ENST00000406535 843 ntBASIC3.29□□□□□ -1.88
VBP1P61758 RNU2-71P-201ENST00000411395 189 ntBASIC3.29□□□□□ -1.88
VBP1P61758 TPT1P2-201ENST00000413105 503 ntBASIC3.29□□□□□ -1.88
VBP1P61758 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.29□□□□□ -1.88
VBP1P61758 AL691447.1-201ENST00000419456 387 ntBASIC3.29□□□□□ -1.88
VBP1P61758 GLRXP1-201ENST00000423261 334 ntBASIC3.29□□□□□ -1.88
VBP1P61758 AC012498.1-201ENST00000424037 437 ntBASIC3.29□□□□□ -1.88
VBP1P61758 RPS29P17-201ENST00000430795 166 ntBASIC3.29□□□□□ -1.88
VBP1P61758 Z74696.2-201ENST00000436514 498 ntBASIC3.29□□□□□ -1.88
VBP1P61758 TBCAP1-201ENST00000436520 327 ntBASIC3.29□□□□□ -1.88
VBP1P61758 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC3.29□□□□□ -1.88
VBP1P61758 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.29□□□□□ -1.88
VBP1P61758 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.29□□□□□ -1.88
VBP1P61758 AC099563.1-201ENST00000456086 418 ntBASIC3.29□□□□□ -1.88
VBP1P61758 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.29□□□□□ -1.88
VBP1P61758 RN7SL101P-201ENST00000496350 279 ntBASIC3.29□□□□□ -1.88
VBP1P61758 RN7SKP289-201ENST00000517244 295 ntBASIC3.29□□□□□ -1.88
VBP1P61758 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.29□□□□□ -1.88
VBP1P61758 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.29□□□□□ -1.88
VBP1P61758 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.29□□□□□ -1.88
VBP1P61758 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.29□□□□□ -1.88
VBP1P61758 AC006960.3-201ENST00000561845 705 ntBASIC3.29□□□□□ -1.88
VBP1P61758 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.29□□□□□ -1.88
VBP1P61758 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VBP1P61758 AL163642.2-201ENST00000604722 1019 ntBASIC3.29□□□□□ -1.88
VBP1P61758 AC055764.2-201ENST00000610089 670 ntBASIC3.29□□□□□ -1.88
VBP1P61758 AL133370.2-201ENST00000619934 439 ntBASIC3.29□□□□□ -1.88
VBP1P61758 AL357559.1-201ENST00000622228 274 ntBASIC3.29□□□□□ -1.88
VBP1P61758 RPL23AP61-201ENST00000623642 466 ntBASIC3.29□□□□□ -1.88
VBP1P61758 AL732372.2-225ENST00000642124 456 ntBASIC3.29□□□□□ -1.88
VBP1P61758 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VBP1P61758 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
VBP1P61758 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
VBP1P61758 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.28□□□□□ -1.88
VBP1P61758 AC131971.1-201ENST00000332881 1482 ntBASIC3.28□□□□□ -1.88
VBP1P61758 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
VBP1P61758 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.28□□□□□ -1.88
VBP1P61758 AC103988.1-201ENST00000566382 2177 ntBASIC3.28□□□□□ -1.88
VBP1P61758 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VBP1P61758 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.28□□□□□ -1.88
VBP1P61758 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VBP1P61758 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VBP1P61758 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VBP1P61758 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VBP1P61758 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
VBP1P61758 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC3.28□□□□□ -1.88
VBP1P61758 HMGB3P23-201ENST00000414981 585 ntBASIC3.28□□□□□ -1.88
VBP1P61758 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.28□□□□□ -1.88
VBP1P61758 RPS24P8-201ENST00000431490 402 ntBASIC3.28□□□□□ -1.88
VBP1P61758 OR2B8P-201ENST00000432841 938 ntBASIC3.28□□□□□ -1.88
VBP1P61758 VDAC1P3-201ENST00000434069 851 ntBASIC3.28□□□□□ -1.88
VBP1P61758 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC3.28□□□□□ -1.88
VBP1P61758 RPL23AP33-201ENST00000442301 452 ntBASIC3.28□□□□□ -1.88
VBP1P61758 AC073648.4-201ENST00000442655 781 ntBASIC3.28□□□□□ -1.88
VBP1P61758 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.28□□□□□ -1.88
VBP1P61758 RPS27P5-201ENST00000444247 244 ntBASIC3.28□□□□□ -1.88
VBP1P61758 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VBP1P61758 AC006480.1-201ENST00000449887 378 ntBASIC3.28□□□□□ -1.88
VBP1P61758 MTND2P8-201ENST00000450555 1025 ntBASIC3.28□□□□□ -1.88
VBP1P61758 AC093392.2-201ENST00000450682 337 ntBASIC3.28□□□□□ -1.88
VBP1P61758 OR9M1P-201ENST00000459641 921 ntBASIC3.28□□□□□ -1.88
VBP1P61758 RPS23P7-201ENST00000466210 444 ntBASIC3.28□□□□□ -1.88
VBP1P61758 RPS20P21-201ENST00000466859 343 ntBASIC3.28□□□□□ -1.88
VBP1P61758 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.28□□□□□ -1.88
VBP1P61758 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.28□□□□□ -1.88
VBP1P61758 RNA5SP380-201ENST00000517190 98 ntBASIC3.28□□□□□ -1.88
VBP1P61758 AP006245.1-201ENST00000522549 120 ntBASIC3.28□□□□□ -1.88
VBP1P61758 PCNPP1-201ENST00000552501 511 ntBASIC3.28□□□□□ -1.88
VBP1P61758 TRAV15-201ENST00000556680 249 ntBASIC3.28□□□□□ -1.88
VBP1P61758 AC115085.1-201ENST00000588924 229 ntBASIC3.28□□□□□ -1.88
VBP1P61758 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.28□□□□□ -1.88
VBP1P61758 AC245128.3-201ENST00000594721 748 ntBASIC3.28□□□□□ -1.88
VBP1P61758 AC011445.2-201ENST00000599274 173 ntBASIC3.28□□□□□ -1.88
VBP1P61758 MTCO2P22-201ENST00000603246 681 ntBASIC3.28□□□□□ -1.88
VBP1P61758 AC092354.2-201ENST00000607786 514 ntBASIC3.28□□□□□ -1.88
VBP1P61758 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC3.28□□□□□ -1.88
VBP1P61758 AL354760.1-201ENST00000608357 643 ntBASIC3.28□□□□□ -1.88
VBP1P61758 AC245389.2-201ENST00000616023 576 ntBASIC3.28□□□□□ -1.88
VBP1P61758 AC243756.2-201ENST00000618406 463 ntBASIC3.28□□□□□ -1.88
VBP1P61758 AC242843.1-201ENST00000618702 573 ntBASIC3.28□□□□□ -1.88
VBP1P61758 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VBP1P61758 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.28□□□□□ -1.88
VBP1P61758 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VBP1P61758 API5P2-201ENST00000397055 1498 ntBASIC3.28□□□□□ -1.88
VBP1P61758 AC007656.2-201ENST00000624902 4547 ntBASIC3.27□□□□□ -1.89
VBP1P61758 AC068647.1-201ENST00000489539 2265 ntBASIC3.27□□□□□ -1.89
VBP1P61758 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms