Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AC068647.1-201ENST00000489539 2265 ntBASIC3.37□□□□□ -1.87
CXCR4P61073 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CXCR4P61073 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CXCR4P61073 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.37□□□□□ -1.87
CXCR4P61073 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CXCR4P61073 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CXCR4P61073 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CXCR4P61073 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.36□□□□□ -1.87
CXCR4P61073 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.36□□□□□ -1.87
CXCR4P61073 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CXCR4P61073 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CXCR4P61073 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
CXCR4P61073 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CXCR4P61073 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.36□□□□□ -1.87
CXCR4P61073 SNORA73.2-201ENST00000364946 201 ntBASIC3.36□□□□□ -1.87
CXCR4P61073 RNA5SP97-201ENST00000365006 84 ntBASIC3.36□□□□□ -1.87
CXCR4P61073 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CXCR4P61073 MTCO3P31-201ENST00000405526 789 ntBASIC3.36□□□□□ -1.87
CXCR4P61073 RNA5SP293-201ENST00000410527 113 ntBASIC3.36□□□□□ -1.87
CXCR4P61073 OR8G2P-201ENST00000412796 908 ntBASIC3.36□□□□□ -1.87
CXCR4P61073 AC004022.2-201ENST00000413824 193 ntBASIC3.36□□□□□ -1.87
CXCR4P61073 RPL26P29-201ENST00000415623 438 ntBASIC3.36□□□□□ -1.87
CXCR4P61073 RPA2P2-201ENST00000419698 796 ntBASIC3.36□□□□□ -1.87
CXCR4P61073 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.36□□□□□ -1.87
CXCR4P61073 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.36□□□□□ -1.87
CXCR4P61073 AC073143.1-201ENST00000436316 395 ntBASIC3.36□□□□□ -1.87
CXCR4P61073 Z74696.2-201ENST00000436514 498 ntBASIC3.36□□□□□ -1.87
CXCR4P61073 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.36□□□□□ -1.87
CXCR4P61073 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CXCR4P61073 AC239367.2-201ENST00000447309 705 ntBASIC3.36□□□□□ -1.87
CXCR4P61073 BUD31P2-201ENST00000449374 300 ntBASIC3.36□□□□□ -1.87
CXCR4P61073 RPS4XP2-201ENST00000458402 793 ntBASIC3.36□□□□□ -1.87
CXCR4P61073 RN7SL442P-201ENST00000473804 320 ntBASIC3.36□□□□□ -1.87
CXCR4P61073 FTH1P24-201ENST00000503502 462 ntBASIC3.36□□□□□ -1.87
CXCR4P61073 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.36□□□□□ -1.87
CXCR4P61073 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.36□□□□□ -1.87
CXCR4P61073 RNU6-579P-201ENST00000516879 102 ntBASIC3.36□□□□□ -1.87
CXCR4P61073 RN7SKP289-201ENST00000517244 295 ntBASIC3.36□□□□□ -1.87
CXCR4P61073 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CXCR4P61073 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.36□□□□□ -1.87
CXCR4P61073 SOD1P3-201ENST00000518682 454 ntBASIC3.36□□□□□ -1.87
CXCR4P61073 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.36□□□□□ -1.87
CXCR4P61073 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.36□□□□□ -1.87
CXCR4P61073 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.36□□□□□ -1.87
CXCR4P61073 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CXCR4P61073 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CXCR4P61073 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.36□□□□□ -1.87
CXCR4P61073 MTCO2P22-201ENST00000603246 681 ntBASIC3.36□□□□□ -1.87
CXCR4P61073 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CXCR4P61073 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CXCR4P61073 AC022079.2-201ENST00000619739 566 ntBASIC3.36□□□□□ -1.87
CXCR4P61073 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.36□□□□□ -1.87
CXCR4P61073 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.36□□□□□ -1.87
CXCR4P61073 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.36□□□□□ -1.87
CXCR4P61073 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CXCR4P61073 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CXCR4P61073 AC073429.2-201ENST00000569694 1444 ntBASIC3.36□□□□□ -1.87
CXCR4P61073 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CXCR4P61073 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CXCR4P61073 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CXCR4P61073 RAD1P1-201ENST00000231383 813 ntBASIC3.35□□□□□ -1.87
CXCR4P61073 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CXCR4P61073 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CXCR4P61073 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.35□□□□□ -1.87
CXCR4P61073 AL031736.2-201ENST00000426573 787 ntBASIC3.35□□□□□ -1.87
CXCR4P61073 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.35□□□□□ -1.87
CXCR4P61073 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
CXCR4P61073 MRPS18BP2-201ENST00000434310 759 ntBASIC3.35□□□□□ -1.87
CXCR4P61073 B3GNT2P1-201ENST00000434960 952 ntBASIC3.35□□□□□ -1.87
CXCR4P61073 RPL31P20-201ENST00000449593 360 ntBASIC3.35□□□□□ -1.87
CXCR4P61073 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.35□□□□□ -1.87
CXCR4P61073 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3.35□□□□□ -1.87
CXCR4P61073 RPL30P11-201ENST00000495304 339 ntBASIC3.35□□□□□ -1.87
CXCR4P61073 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CXCR4P61073 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.35□□□□□ -1.87
CXCR4P61073 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.35□□□□□ -1.87
CXCR4P61073 SNORA31.9-201ENST00000516429 84 ntBASIC3.35□□□□□ -1.87
CXCR4P61073 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.35□□□□□ -1.87
CXCR4P61073 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.35□□□□□ -1.87
CXCR4P61073 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CXCR4P61073 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.35□□□□□ -1.87
CXCR4P61073 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CXCR4P61073 AP005901.4-201ENST00000577336 569 ntBASIC3.35□□□□□ -1.87
CXCR4P61073 AC008745.1-201ENST00000604064 271 ntBASIC3.35□□□□□ -1.87
CXCR4P61073 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CXCR4P61073 AC090425.2-201ENST00000608818 501 ntBASIC3.35□□□□□ -1.87
CXCR4P61073 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CXCR4P61073 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.35□□□□□ -1.87
CXCR4P61073 AC022149.2-201ENST00000621061 203 ntBASIC3.35□□□□□ -1.87
CXCR4P61073 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.35□□□□□ -1.87
CXCR4P61073 AL353746.1-201ENST00000566293 6881 ntBASIC3.35□□□□□ -1.87
CXCR4P61073 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CXCR4P61073 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.35□□□□□ -1.87
CXCR4P61073 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CXCR4P61073 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CXCR4P61073 FAM91A3P-201ENST00000456826 2544 ntBASIC3.34□□□□□ -1.87
CXCR4P61073 RLIMP1-201ENST00000339626 1680 ntBASIC3.34□□□□□ -1.87
CXCR4P61073 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CXCR4P61073 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CXCR4P61073 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms