Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MTCO3P1-205ENST00000422088 832 ntBASIC5.35□□□□□ -1.55
RHBDL3P58872 NANOGP5-201ENST00000424456 877 ntBASIC5.35□□□□□ -1.55
RHBDL3P58872 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.35□□□□□ -1.55
RHBDL3P58872 NMNAT1P2-201ENST00000435192 860 ntBASIC5.35□□□□□ -1.55
RHBDL3P58872 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.35□□□□□ -1.55
RHBDL3P58872 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.35□□□□□ -1.55
RHBDL3P58872 ZNF886P-201ENST00000450781 723 ntBASIC5.35□□□□□ -1.55
RHBDL3P58872 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.35□□□□□ -1.55
RHBDL3P58872 AC010307.1-201ENST00000467206 836 ntBASIC5.35□□□□□ -1.55
RHBDL3P58872 AC041039.1-201ENST00000485656 536 ntBASIC5.35□□□□□ -1.55
RHBDL3P58872 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RHBDL3P58872 AC069304.1-201ENST00000491593 704 ntBASIC5.35□□□□□ -1.55
RHBDL3P58872 AC091167.1-201ENST00000492017 396 ntBASIC5.35□□□□□ -1.55
RHBDL3P58872 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC5.35□□□□□ -1.55
RHBDL3P58872 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.35□□□□□ -1.55
RHBDL3P58872 PTGES3P3-201ENST00000511479 482 ntBASIC5.35□□□□□ -1.55
RHBDL3P58872 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.35□□□□□ -1.55
RHBDL3P58872 AC027309.2-201ENST00000520566 192 ntBASIC5.35□□□□□ -1.55
RHBDL3P58872 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.35□□□□□ -1.55
RHBDL3P58872 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.35□□□□□ -1.55
RHBDL3P58872 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RHBDL3P58872 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.35□□□□□ -1.55
RHBDL3P58872 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.35□□□□□ -1.55
RHBDL3P58872 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.35□□□□□ -1.55
RHBDL3P58872 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.35□□□□□ -1.55
RHBDL3P58872 AL132857.1-201ENST00000555180 708 ntBASIC5.35□□□□□ -1.55
RHBDL3P58872 PSMB7P1-201ENST00000556349 514 ntBASIC5.35□□□□□ -1.55
RHBDL3P58872 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.35□□□□□ -1.55
RHBDL3P58872 VN1R83P-201ENST00000595685 445 ntBASIC5.35□□□□□ -1.55
RHBDL3P58872 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.35□□□□□ -1.55
RHBDL3P58872 AC067852.7-201ENST00000623270 535 ntBASIC5.35□□□□□ -1.55
RHBDL3P58872 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.35□□□□□ -1.55
RHBDL3P58872 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RHBDL3P58872 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
RHBDL3P58872 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.35□□□□□ -1.55
RHBDL3P58872 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
RHBDL3P58872 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.35□□□□□ -1.55
RHBDL3P58872 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
RHBDL3P58872 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
RHBDL3P58872 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
RHBDL3P58872 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.34□□□□□ -1.55
RHBDL3P58872 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RHBDL3P58872 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RHBDL3P58872 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.34□□□□□ -1.55
RHBDL3P58872 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.34□□□□□ -1.55
RHBDL3P58872 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RHBDL3P58872 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.34□□□□□ -1.55
RHBDL3P58872 OR56B2P-201ENST00000317102 954 ntBASIC5.34□□□□□ -1.55
RHBDL3P58872 RNU1-83P-201ENST00000363426 164 ntBASIC5.34□□□□□ -1.55
RHBDL3P58872 RNU4-68P-201ENST00000364314 141 ntBASIC5.34□□□□□ -1.55
RHBDL3P58872 RNU6-413P-201ENST00000384115 107 ntBASIC5.34□□□□□ -1.55
RHBDL3P58872 MTND4P22-201ENST00000413116 1169 ntBASIC5.34□□□□□ -1.55
RHBDL3P58872 AC005345.1-201ENST00000431868 217 ntBASIC5.34□□□□□ -1.55
RHBDL3P58872 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.34□□□□□ -1.55
RHBDL3P58872 RPS3AP54-201ENST00000435535 734 ntBASIC5.34□□□□□ -1.55
RHBDL3P58872 OR10R1P-201ENST00000441524 1141 ntBASIC5.34□□□□□ -1.55
RHBDL3P58872 PHBP16-201ENST00000446318 950 ntBASIC5.34□□□□□ -1.55
RHBDL3P58872 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.34□□□□□ -1.55
RHBDL3P58872 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.34□□□□□ -1.55
RHBDL3P58872 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.34□□□□□ -1.55
RHBDL3P58872 AC092155.2-201ENST00000454675 477 ntBASIC5.34□□□□□ -1.55
RHBDL3P58872 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.34□□□□□ -1.55
RHBDL3P58872 MTCO1P30-201ENST00000515244 580 ntBASIC5.34□□□□□ -1.55
RHBDL3P58872 AC087808.1-201ENST00000520501 361 ntBASIC5.34□□□□□ -1.55
RHBDL3P58872 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.34□□□□□ -1.55
RHBDL3P58872 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.34□□□□□ -1.55
RHBDL3P58872 OR6C73P-201ENST00000546432 358 ntBASIC5.34□□□□□ -1.55
RHBDL3P58872 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.34□□□□□ -1.55
RHBDL3P58872 AL049838.1-201ENST00000563647 981 ntBASIC5.34□□□□□ -1.55
RHBDL3P58872 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RHBDL3P58872 AC090181.2-201ENST00000602975 672 ntBASIC5.34□□□□□ -1.55
RHBDL3P58872 BPIFA4P-203ENST00000603168 689 ntBASIC5.34□□□□□ -1.55
RHBDL3P58872 YWHAQP7-201ENST00000603536 658 ntBASIC5.34□□□□□ -1.55
RHBDL3P58872 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.34□□□□□ -1.55
RHBDL3P58872 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.34□□□□□ -1.55
RHBDL3P58872 AC027449.1-201ENST00000608890 407 ntBASIC5.34□□□□□ -1.55
RHBDL3P58872 AC006065.6-201ENST00000625201 545 ntBASIC5.34□□□□□ -1.55
RHBDL3P58872 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.34□□□□□ -1.55
RHBDL3P58872 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RHBDL3P58872 AL731566.1-201ENST00000620490 1937 ntBASIC5.34□□□□□ -1.55
RHBDL3P58872 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RHBDL3P58872 Z95331.1-201ENST00000623075 23112 ntBASIC5.34□□□□□ -1.56
RHBDL3P58872 THAP12P5-201ENST00000405864 2275 ntBASIC5.34□□□□□ -1.56
RHBDL3P58872 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RHBDL3P58872 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.33□□□□□ -1.56
RHBDL3P58872 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.33□□□□□ -1.56
RHBDL3P58872 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.33□□□□□ -1.56
RHBDL3P58872 AC099786.3-201ENST00000565735 1410 ntBASIC5.33□□□□□ -1.56
RHBDL3P58872 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
RHBDL3P58872 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.33□□□□□ -1.56
RHBDL3P58872 SEPT7P7-201ENST00000420492 1301 ntBASIC5.33□□□□□ -1.56
RHBDL3P58872 RNU1-132P-201ENST00000364300 164 ntBASIC5.33□□□□□ -1.56
RHBDL3P58872 SNORA40.2-201ENST00000390847 128 ntBASIC5.33□□□□□ -1.56
RHBDL3P58872 AL592291.1-201ENST00000403830 352 ntBASIC5.33□□□□□ -1.56
RHBDL3P58872 AL136133.1-201ENST00000413694 376 ntBASIC5.33□□□□□ -1.56
RHBDL3P58872 AC092634.6-201ENST00000418558 192 ntBASIC5.33□□□□□ -1.56
RHBDL3P58872 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.33□□□□□ -1.56
RHBDL3P58872 AC092648.1-201ENST00000425870 423 ntBASIC5.33□□□□□ -1.56
RHBDL3P58872 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.33□□□□□ -1.56
RHBDL3P58872 RPL23AP33-201ENST00000442301 452 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms