Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SNORA70F-201ENST00000384142 135 ntBASIC4.06□□□□□ -1.76
CDH11P55287 AC093719.1-202ENST00000392735 373 ntBASIC4.06□□□□□ -1.76
CDH11P55287 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH11P55287 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDH11P55287 COX6CP17-201ENST00000421389 185 ntBASIC4.06□□□□□ -1.76
CDH11P55287 AL590609.2-201ENST00000421430 368 ntBASIC4.06□□□□□ -1.76
CDH11P55287 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH11P55287 RPL18P10-201ENST00000425606 538 ntBASIC4.06□□□□□ -1.76
CDH11P55287 RPL7P4-203ENST00000430239 730 ntBASIC4.06□□□□□ -1.76
CDH11P55287 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.06□□□□□ -1.76
CDH11P55287 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.06□□□□□ -1.76
CDH11P55287 GTF2IP7-202ENST00000436677 309 ntBASIC4.06□□□□□ -1.76
CDH11P55287 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.06□□□□□ -1.76
CDH11P55287 AL162591.2-201ENST00000449634 317 ntBASIC4.06□□□□□ -1.76
CDH11P55287 VN1R32P-201ENST00000452234 905 ntBASIC4.06□□□□□ -1.76
CDH11P55287 AL354710.1-201ENST00000453641 246 ntBASIC4.06□□□□□ -1.76
CDH11P55287 DDX39BP2-208ENST00000453923 258 ntBASIC4.06□□□□□ -1.76
CDH11P55287 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH11P55287 OR52A4P-201ENST00000472867 958 ntBASIC4.06□□□□□ -1.76
CDH11P55287 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH11P55287 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH11P55287 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH11P55287 AC113347.3-201ENST00000509113 148 ntBASIC4.06□□□□□ -1.76
CDH11P55287 RNA5SP154-201ENST00000516193 111 ntBASIC4.06□□□□□ -1.76
CDH11P55287 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH11P55287 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.06□□□□□ -1.76
CDH11P55287 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDH11P55287 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH11P55287 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CDH11P55287 DUXAP5-201ENST00000529668 529 ntBASIC4.06□□□□□ -1.76
CDH11P55287 AC009643.1-201ENST00000532030 391 ntBASIC4.06□□□□□ -1.76
CDH11P55287 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH11P55287 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.06□□□□□ -1.76
CDH11P55287 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDH11P55287 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH11P55287 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.06□□□□□ -1.76
CDH11P55287 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.06□□□□□ -1.76
CDH11P55287 AC105129.1-201ENST00000560250 297 ntBASIC4.06□□□□□ -1.76
CDH11P55287 MIR5708-201ENST00000579723 85 ntBASIC4.06□□□□□ -1.76
CDH11P55287 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH11P55287 AC069366.1-201ENST00000583159 838 ntBASIC4.06□□□□□ -1.76
CDH11P55287 AC091057.2-201ENST00000602594 792 ntBASIC4.06□□□□□ -1.76
CDH11P55287 AC025588.2-201ENST00000604851 466 ntBASIC4.06□□□□□ -1.76
CDH11P55287 AL355816.1-201ENST00000607951 118 ntBASIC4.06□□□□□ -1.76
CDH11P55287 AC099676.1-201ENST00000608886 657 ntBASIC4.06□□□□□ -1.76
CDH11P55287 AL445423.1-201ENST00000609941 536 ntBASIC4.06□□□□□ -1.76
CDH11P55287 AC009464.1-201ENST00000615731 469 ntBASIC4.06□□□□□ -1.76
CDH11P55287 AL157770.1-201ENST00000623049 439 ntBASIC4.06□□□□□ -1.76
CDH11P55287 CR392039.4-201ENST00000624968 501 ntBASIC4.06□□□□□ -1.76
CDH11P55287 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDH11P55287 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.06□□□□□ -1.76
CDH11P55287 MAPK10-304ENST00000641341 3984 ntBASIC4.06□□□□□ -1.76
CDH11P55287 AC134882.1-201ENST00000603738 1676 ntBASIC4.06□□□□□ -1.76
CDH11P55287 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
CDH11P55287 AC108467.2-201ENST00000617640 1597 ntBASIC4.06□□□□□ -1.76
CDH11P55287 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.05□□□□□ -1.76
CDH11P55287 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDH11P55287 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CDH11P55287 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.05□□□□□ -1.76
CDH11P55287 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDH11P55287 AL592148.3-201ENST00000608771 2646 ntBASIC4.05□□□□□ -1.76
CDH11P55287 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.05□□□□□ -1.76
CDH11P55287 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDH11P55287 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.05□□□□□ -1.76
CDH11P55287 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CDH11P55287 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDH11P55287 RNA5SP307-201ENST00000362863 116 ntBASIC4.05□□□□□ -1.76
CDH11P55287 RNU6-178P-201ENST00000384631 104 ntBASIC4.05□□□□□ -1.76
CDH11P55287 RNA5SP397-201ENST00000391323 118 ntBASIC4.05□□□□□ -1.76
CDH11P55287 AC119751.3-201ENST00000399720 670 ntBASIC4.05□□□□□ -1.76
CDH11P55287 SFR1P1-201ENST00000403720 688 ntBASIC4.05□□□□□ -1.76
CDH11P55287 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.05□□□□□ -1.76
CDH11P55287 AC009302.1-201ENST00000417147 390 ntBASIC4.05□□□□□ -1.76
CDH11P55287 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.05□□□□□ -1.76
CDH11P55287 PAICSP7-201ENST00000419829 962 ntBASIC4.05□□□□□ -1.76
CDH11P55287 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.05□□□□□ -1.76
CDH11P55287 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDH11P55287 HLA-N-201ENST00000437516 135 ntBASIC4.05□□□□□ -1.76
CDH11P55287 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.05□□□□□ -1.76
CDH11P55287 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CDH11P55287 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.05□□□□□ -1.76
CDH11P55287 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.05□□□□□ -1.76
CDH11P55287 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CDH11P55287 SCARNA10-201ENST00000459255 330 ntBASIC4.05□□□□□ -1.76
CDH11P55287 AC084024.2-201ENST00000503480 791 ntBASIC4.05□□□□□ -1.76
CDH11P55287 AC006499.6-201ENST00000511169 607 ntBASIC4.05□□□□□ -1.76
CDH11P55287 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.05□□□□□ -1.76
CDH11P55287 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.05□□□□□ -1.76
CDH11P55287 OR4A2P-201ENST00000527276 913 ntBASIC4.05□□□□□ -1.76
CDH11P55287 AC023050.2-201ENST00000544968 387 ntBASIC4.05□□□□□ -1.76
CDH11P55287 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.05□□□□□ -1.76
CDH11P55287 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.05□□□□□ -1.76
CDH11P55287 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.05□□□□□ -1.76
CDH11P55287 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDH11P55287 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.05□□□□□ -1.76
CDH11P55287 CYP4A43P-201ENST00000568156 121 ntBASIC4.05□□□□□ -1.76
CDH11P55287 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDH11P55287 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.05□□□□□ -1.76
CDH11P55287 BPTFP1-201ENST00000579209 492 ntBASIC4.05□□□□□ -1.76
CDH11P55287 AC090312.1-201ENST00000580637 348 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms