Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC007424.1-203ENST00000554613 687 ntBASIC6.21□□□□□ -1.42
USP11P51784 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC6.21□□□□□ -1.42
USP11P51784 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC6.21□□□□□ -1.42
USP11P51784 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC6.21□□□□□ -1.42
USP11P51784 NRBF2P5-201ENST00000603087 788 ntBASIC6.21□□□□□ -1.42
USP11P51784 AL391646.1-201ENST00000603860 190 ntBASIC6.21□□□□□ -1.42
USP11P51784 PRELID3BP8-201ENST00000604148 295 ntBASIC6.21□□□□□ -1.42
USP11P51784 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
USP11P51784 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
USP11P51784 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.21□□□□□ -1.42
USP11P51784 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
USP11P51784 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.21□□□□□ -1.42
USP11P51784 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
USP11P51784 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
USP11P51784 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
USP11P51784 BCORP1-203ENST00000513194 5093 ntBASIC6.21□□□□□ -1.42
USP11P51784 CDR1-202ENST00000625883 1485 ntBASIC6.21□□□□□ -1.42
USP11P51784 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.2□□□□□ -1.42
USP11P51784 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USP11P51784 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
USP11P51784 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USP11P51784 AC093849.1-201ENST00000563631 2209 ntBASIC6.2□□□□□ -1.42
USP11P51784 Y_RNA.72-201ENST00000362894 103 ntBASIC6.2□□□□□ -1.42
USP11P51784 RNU6-1066P-201ENST00000363573 105 ntBASIC6.2□□□□□ -1.42
USP11P51784 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.2□□□□□ -1.42
USP11P51784 RNU6-767P-201ENST00000384132 107 ntBASIC6.2□□□□□ -1.42
USP11P51784 SNORA16A-201ENST00000384342 137 ntBASIC6.2□□□□□ -1.42
USP11P51784 RNU6-185P-201ENST00000384421 107 ntBASIC6.2□□□□□ -1.42
USP11P51784 U8.14-201ENST00000390843 143 ntBASIC6.2□□□□□ -1.42
USP11P51784 AC009804.1-201ENST00000400949 179 ntBASIC6.2□□□□□ -1.42
USP11P51784 RNU6-908P-201ENST00000410160 94 ntBASIC6.2□□□□□ -1.42
USP11P51784 RNU6-195P-201ENST00000411352 109 ntBASIC6.2□□□□□ -1.42
USP11P51784 AC062016.2-201ENST00000420950 676 ntBASIC6.2□□□□□ -1.42
USP11P51784 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC6.2□□□□□ -1.42
USP11P51784 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC6.2□□□□□ -1.42
USP11P51784 SDCBPP2-201ENST00000424643 885 ntBASIC6.2□□□□□ -1.42
USP11P51784 PRUNEP1-201ENST00000425846 705 ntBASIC6.2□□□□□ -1.42
USP11P51784 RPL12P18-201ENST00000437175 325 ntBASIC6.2□□□□□ -1.42
USP11P51784 CYCSP12-201ENST00000437729 300 ntBASIC6.2□□□□□ -1.42
USP11P51784 PPIAP17-201ENST00000438507 471 ntBASIC6.2□□□□□ -1.42
USP11P51784 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.2□□□□□ -1.42
USP11P51784 AC073465.2-201ENST00000440938 498 ntBASIC6.2□□□□□ -1.42
USP11P51784 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC6.2□□□□□ -1.42
USP11P51784 Z80107.2-201ENST00000445127 392 ntBASIC6.2□□□□□ -1.42
USP11P51784 NPM1P39-201ENST00000449818 867 ntBASIC6.2□□□□□ -1.42
USP11P51784 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC6.2□□□□□ -1.42
USP11P51784 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.2□□□□□ -1.42
USP11P51784 SIAH1P1-201ENST00000479411 923 ntBASIC6.2□□□□□ -1.42
USP11P51784 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USP11P51784 THAP6-203ENST00000502620 582 ntTSL 3 BASIC6.2□□□□□ -1.42
USP11P51784 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USP11P51784 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USP11P51784 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC6.2□□□□□ -1.42
USP11P51784 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC6.2□□□□□ -1.42
USP11P51784 KCTD9P2-201ENST00000512203 1013 ntBASIC6.2□□□□□ -1.42
USP11P51784 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC6.2□□□□□ -1.42
USP11P51784 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USP11P51784 BX510359.5-201ENST00000515651 304 ntBASIC6.2□□□□□ -1.42
USP11P51784 RNU6-1281P-201ENST00000516223 105 ntBASIC6.2□□□□□ -1.42
USP11P51784 SCARNA16.4-201ENST00000516956 187 ntBASIC6.2□□□□□ -1.42
USP11P51784 AP001189.2-201ENST00000527320 189 ntBASIC6.2□□□□□ -1.42
USP11P51784 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.2□□□□□ -1.42
USP11P51784 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.2□□□□□ -1.42
USP11P51784 AL121821.2-201ENST00000556081 394 ntBASIC6.2□□□□□ -1.42
USP11P51784 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC6.2□□□□□ -1.42
USP11P51784 AC141257.3-201ENST00000572906 215 ntBASIC6.2□□□□□ -1.42
USP11P51784 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC6.2□□□□□ -1.42
USP11P51784 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.2□□□□□ -1.42
USP11P51784 AC116312.1-201ENST00000606841 314 ntBASIC6.2□□□□□ -1.42
USP11P51784 AC022467.1-201ENST00000614738 749 ntBASIC6.2□□□□□ -1.42
USP11P51784 uc_338.7-201ENST00000621834 124 ntBASIC6.2□□□□□ -1.42
USP11P51784 AC110994.2-201ENST00000635481 492 ntBASIC6.2□□□□□ -1.42
USP11P51784 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.2□□□□□ -1.42
USP11P51784 AC104964.3-201ENST00000606115 2860 ntBASIC6.2□□□□□ -1.42
USP11P51784 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.2□□□□□ -1.42
USP11P51784 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
USP11P51784 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
USP11P51784 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USP11P51784 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
USP11P51784 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USP11P51784 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
USP11P51784 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USP11P51784 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.2□□□□□ -1.42
USP11P51784 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USP11P51784 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USP11P51784 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
USP11P51784 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
USP11P51784 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
USP11P51784 ZNF733P-202ENST00000444809 1573 ntBASIC6.19□□□□□ -1.42
USP11P51784 FARSBP1-201ENST00000435808 1778 ntBASIC6.19□□□□□ -1.42
USP11P51784 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC6.19□□□□□ -1.42
USP11P51784 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
USP11P51784 RNU6-462P-201ENST00000362659 105 ntBASIC6.19□□□□□ -1.42
USP11P51784 RN7SKP162-201ENST00000363605 345 ntBASIC6.19□□□□□ -1.42
USP11P51784 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
USP11P51784 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC6.19□□□□□ -1.42
USP11P51784 AC004987.3-201ENST00000413879 771 ntBASIC6.19□□□□□ -1.42
USP11P51784 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.19□□□□□ -1.42
USP11P51784 AL353729.1-201ENST00000425044 720 ntBASIC6.19□□□□□ -1.42
USP11P51784 DPY19L1P2-201ENST00000426647 915 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms