Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 MTND6P6-201ENST00000478031 263 ntBASIC4.33□□□□□ -1.72
LHX1P48742 AC006517.1-201ENST00000480485 328 ntBASIC4.33□□□□□ -1.72
LHX1P48742 RN7SL271P-201ENST00000487601 295 ntBASIC4.33□□□□□ -1.72
LHX1P48742 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LHX1P48742 KRT19P6-201ENST00000510983 209 ntBASIC4.33□□□□□ -1.72
LHX1P48742 AC006499.6-201ENST00000511169 607 ntBASIC4.33□□□□□ -1.72
LHX1P48742 AC124293.1-201ENST00000530034 493 ntBASIC4.33□□□□□ -1.72
LHX1P48742 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.33□□□□□ -1.72
LHX1P48742 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.33□□□□□ -1.72
LHX1P48742 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.33□□□□□ -1.72
LHX1P48742 MTND6P33-201ENST00000571794 183 ntBASIC4.33□□□□□ -1.72
LHX1P48742 MIR4286-201ENST00000580651 93 ntBASIC4.33□□□□□ -1.72
LHX1P48742 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LHX1P48742 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.33□□□□□ -1.72
LHX1P48742 AC011458.1-201ENST00000604034 617 ntBASIC4.33□□□□□ -1.72
LHX1P48742 AL451044.1-201ENST00000604867 238 ntBASIC4.33□□□□□ -1.72
LHX1P48742 AL031666.3-201ENST00000609320 1006 ntBASIC4.33□□□□□ -1.72
LHX1P48742 AC008785.1-201ENST00000624475 456 ntBASIC4.33□□□□□ -1.72
LHX1P48742 AP003072.4-201ENST00000624580 310 ntBASIC4.33□□□□□ -1.72
LHX1P48742 OR5BE1P-202ENST00000641168 1176 ntBASIC4.33□□□□□ -1.72
LHX1P48742 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
LHX1P48742 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.33□□□□□ -1.72
LHX1P48742 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LHX1P48742 AC090971.4-201ENST00000560291 1800 ntBASIC4.32□□□□□ -1.72
LHX1P48742 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.32□□□□□ -1.72
LHX1P48742 AC114546.3-201ENST00000623582 1734 ntBASIC4.32□□□□□ -1.72
LHX1P48742 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.32□□□□□ -1.72
LHX1P48742 AL049737.1-201ENST00000413920 1403 ntBASIC4.32□□□□□ -1.72
LHX1P48742 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
LHX1P48742 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.32□□□□□ -1.72
LHX1P48742 AL645568.2-201ENST00000432815 1337 ntBASIC4.32□□□□□ -1.72
LHX1P48742 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.32□□□□□ -1.72
LHX1P48742 SNORD35B-201ENST00000363660 87 ntBASIC4.32□□□□□ -1.72
LHX1P48742 MIR122-201ENST00000385044 85 ntBASIC4.32□□□□□ -1.72
LHX1P48742 RPL7P27-201ENST00000403775 720 ntBASIC4.32□□□□□ -1.72
LHX1P48742 RNU2-65P-201ENST00000410162 185 ntBASIC4.32□□□□□ -1.72
LHX1P48742 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.32□□□□□ -1.72
LHX1P48742 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.32□□□□□ -1.72
LHX1P48742 OR8F1P-201ENST00000425243 930 ntBASIC4.32□□□□□ -1.72
LHX1P48742 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.32□□□□□ -1.72
LHX1P48742 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.32□□□□□ -1.72
LHX1P48742 HMGB1P45-201ENST00000435986 653 ntBASIC4.32□□□□□ -1.72
LHX1P48742 AL592437.1-201ENST00000443781 492 ntBASIC4.32□□□□□ -1.72
LHX1P48742 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.32□□□□□ -1.72
LHX1P48742 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.32□□□□□ -1.72
LHX1P48742 RPL7AP28-201ENST00000464513 571 ntBASIC4.32□□□□□ -1.72
LHX1P48742 FTH1P2-201ENST00000466086 412 ntBASIC4.32□□□□□ -1.72
LHX1P48742 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.32□□□□□ -1.72
LHX1P48742 AC104982.1-201ENST00000478775 574 ntBASIC4.32□□□□□ -1.72
LHX1P48742 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.32□□□□□ -1.72
LHX1P48742 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.32□□□□□ -1.72
LHX1P48742 AC110792.1-201ENST00000491826 472 ntBASIC4.32□□□□□ -1.72
LHX1P48742 AC017037.1-201ENST00000508460 471 ntBASIC4.32□□□□□ -1.72
LHX1P48742 AC010376.1-201ENST00000522101 334 ntBASIC4.32□□□□□ -1.72
LHX1P48742 AC091516.1-201ENST00000549191 703 ntBASIC4.32□□□□□ -1.72
LHX1P48742 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.32□□□□□ -1.72
LHX1P48742 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.32□□□□□ -1.72
LHX1P48742 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.32□□□□□ -1.72
LHX1P48742 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.32□□□□□ -1.72
LHX1P48742 AC124068.1-201ENST00000563131 678 ntBASIC4.32□□□□□ -1.72
LHX1P48742 NF1P5-201ENST00000588287 448 ntBASIC4.32□□□□□ -1.72
LHX1P48742 VN1R88P-201ENST00000596787 292 ntBASIC4.32□□□□□ -1.72
LHX1P48742 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.32□□□□□ -1.72
LHX1P48742 AL020997.2-201ENST00000602607 184 ntBASIC4.32□□□□□ -1.72
LHX1P48742 AC018754.1-201ENST00000607486 925 ntBASIC4.32□□□□□ -1.72
LHX1P48742 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.32□□□□□ -1.72
LHX1P48742 AC104763.3-201ENST00000613765 618 ntBASIC4.32□□□□□ -1.72
LHX1P48742 AL158196.1-201ENST00000616786 434 ntBASIC4.32□□□□□ -1.72
LHX1P48742 AC009318.3-201ENST00000616916 503 ntBASIC4.32□□□□□ -1.72
LHX1P48742 AC018926.3-201ENST00000618841 406 ntBASIC4.32□□□□□ -1.72
LHX1P48742 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
LHX1P48742 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.32□□□□□ -1.72
LHX1P48742 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.32□□□□□ -1.72
LHX1P48742 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
LHX1P48742 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
LHX1P48742 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.32□□□□□ -1.72
LHX1P48742 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.32□□□□□ -1.72
LHX1P48742 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LHX1P48742 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
LHX1P48742 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LHX1P48742 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.32□□□□□ -1.72
LHX1P48742 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.31□□□□□ -1.72
LHX1P48742 AC017104.4-201ENST00000636283 1592 ntBASIC4.31□□□□□ -1.72
LHX1P48742 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
LHX1P48742 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LHX1P48742 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
LHX1P48742 DDX18P3-201ENST00000404856 2007 ntBASIC4.31□□□□□ -1.72
LHX1P48742 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LHX1P48742 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LHX1P48742 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
LHX1P48742 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LHX1P48742 RNU1-108P-201ENST00000362556 161 ntBASIC4.31□□□□□ -1.72
LHX1P48742 RNU6-298P-201ENST00000390888 96 ntBASIC4.31□□□□□ -1.72
LHX1P48742 AL512430.2-201ENST00000406786 339 ntBASIC4.31□□□□□ -1.72
LHX1P48742 RNU6-77P-201ENST00000410554 91 ntBASIC4.31□□□□□ -1.72
LHX1P48742 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.31□□□□□ -1.72
LHX1P48742 TAF13P2-201ENST00000416876 286 ntBASIC4.31□□□□□ -1.72
LHX1P48742 MTND2P15-201ENST00000418575 892 ntBASIC4.31□□□□□ -1.72
LHX1P48742 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.31□□□□□ -1.72
LHX1P48742 AL691449.1-201ENST00000426570 421 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms