Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 CFTRP1-201ENST00000456646 183 ntBASIC4.35□□□□□ -1.71
SOX2P48431 RPL30P9-201ENST00000465586 330 ntBASIC4.35□□□□□ -1.71
SOX2P48431 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.35□□□□□ -1.71
SOX2P48431 AC010350.1-201ENST00000504908 231 ntBASIC4.35□□□□□ -1.71
SOX2P48431 AC079140.3-201ENST00000511111 550 ntBASIC4.35□□□□□ -1.71
SOX2P48431 AL117351.2-201ENST00000513571 157 ntBASIC4.35□□□□□ -1.71
SOX2P48431 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.35□□□□□ -1.71
SOX2P48431 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.35□□□□□ -1.71
SOX2P48431 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.35□□□□□ -1.71
SOX2P48431 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.35□□□□□ -1.71
SOX2P48431 AC087276.1-201ENST00000529659 480 ntBASIC4.35□□□□□ -1.71
SOX2P48431 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SOX2P48431 AP002963.1-201ENST00000530590 184 ntBASIC4.35□□□□□ -1.71
SOX2P48431 AC022880.1-201ENST00000534017 973 ntBASIC4.35□□□□□ -1.71
SOX2P48431 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.35□□□□□ -1.71
SOX2P48431 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.35□□□□□ -1.71
SOX2P48431 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.35□□□□□ -1.71
SOX2P48431 CYCSP2-201ENST00000558168 301 ntBASIC4.35□□□□□ -1.71
SOX2P48431 AC090515.3-201ENST00000560431 315 ntBASIC4.35□□□□□ -1.71
SOX2P48431 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.35□□□□□ -1.71
SOX2P48431 EIF5A2P1-201ENST00000564027 460 ntBASIC4.35□□□□□ -1.71
SOX2P48431 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.35□□□□□ -1.71
SOX2P48431 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.35□□□□□ -1.71
SOX2P48431 ZNF415P1-201ENST00000582279 1166 ntBASIC4.35□□□□□ -1.71
SOX2P48431 AC079089.3-201ENST00000603094 673 ntBASIC4.35□□□□□ -1.71
SOX2P48431 AC004492.1-201ENST00000607036 742 ntBASIC4.35□□□□□ -1.71
SOX2P48431 AC006338.2-201ENST00000616864 791 ntBASIC4.35□□□□□ -1.71
SOX2P48431 AL359740.1-201ENST00000624340 592 ntBASIC4.35□□□□□ -1.71
SOX2P48431 AC025048.6-202ENST00000627667 438 ntBASIC4.35□□□□□ -1.71
SOX2P48431 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SOX2P48431 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SOX2P48431 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SOX2P48431 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SOX2P48431 MTCO1P23-201ENST00000415223 1526 ntBASIC4.35□□□□□ -1.71
SOX2P48431 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SOX2P48431 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.35□□□□□ -1.71
SOX2P48431 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.35□□□□□ -1.71
SOX2P48431 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.35□□□□□ -1.71
SOX2P48431 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SOX2P48431 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.34□□□□□ -1.71
SOX2P48431 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
SOX2P48431 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.34□□□□□ -1.71
SOX2P48431 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.34□□□□□ -1.71
SOX2P48431 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.34□□□□□ -1.71
SOX2P48431 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.34□□□□□ -1.71
SOX2P48431 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
SOX2P48431 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SOX2P48431 OR4A15-201ENST00000314706 1035 ntBASIC4.34□□□□□ -1.71
SOX2P48431 RNU6-462P-201ENST00000362659 105 ntBASIC4.34□□□□□ -1.71
SOX2P48431 RNU6-501P-201ENST00000364072 100 ntBASIC4.34□□□□□ -1.71
SOX2P48431 RNU4-91P-201ENST00000364778 135 ntBASIC4.34□□□□□ -1.71
SOX2P48431 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SOX2P48431 RNU6-657P-201ENST00000383904 107 ntBASIC4.34□□□□□ -1.71
SOX2P48431 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SOX2P48431 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SOX2P48431 AC007066.1-201ENST00000392902 381 ntBASIC4.34□□□□□ -1.71
SOX2P48431 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SOX2P48431 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
SOX2P48431 RN7SKP114-201ENST00000410327 279 ntBASIC4.34□□□□□ -1.71
SOX2P48431 RNU2-16P-201ENST00000410712 136 ntBASIC4.34□□□□□ -1.71
SOX2P48431 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.34□□□□□ -1.71
SOX2P48431 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.34□□□□□ -1.71
SOX2P48431 SDCBPP2-201ENST00000424643 885 ntBASIC4.34□□□□□ -1.71
SOX2P48431 CKS1BP6-201ENST00000424932 240 ntBASIC4.34□□□□□ -1.71
SOX2P48431 AL031736.2-201ENST00000426573 787 ntBASIC4.34□□□□□ -1.71
SOX2P48431 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.34□□□□□ -1.71
SOX2P48431 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.34□□□□□ -1.71
SOX2P48431 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.34□□□□□ -1.71
SOX2P48431 YWHAZP8-201ENST00000436935 731 ntBASIC4.34□□□□□ -1.71
SOX2P48431 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.34□□□□□ -1.71
SOX2P48431 AC092641.1-201ENST00000440229 772 ntBASIC4.34□□□□□ -1.71
SOX2P48431 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.34□□□□□ -1.71
SOX2P48431 AL831737.1-201ENST00000441288 271 ntBASIC4.34□□□□□ -1.71
SOX2P48431 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.34□□□□□ -1.71
SOX2P48431 BMI1P1-201ENST00000445879 941 ntBASIC4.34□□□□□ -1.71
SOX2P48431 COX6CP12-201ENST00000446748 202 ntBASIC4.34□□□□□ -1.71
SOX2P48431 ST13P20-201ENST00000447996 1065 ntBASIC4.34□□□□□ -1.71
SOX2P48431 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.34□□□□□ -1.71
SOX2P48431 RPL5P32-201ENST00000454085 879 ntBASIC4.34□□□□□ -1.71
SOX2P48431 CYCSP34-201ENST00000458172 304 ntBASIC4.34□□□□□ -1.71
SOX2P48431 AC010301.1-201ENST00000473936 355 ntBASIC4.34□□□□□ -1.71
SOX2P48431 RN7SL466P-201ENST00000497546 295 ntBASIC4.34□□□□□ -1.71
SOX2P48431 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.34□□□□□ -1.71
SOX2P48431 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.34□□□□□ -1.71
SOX2P48431 RN7SKP70-201ENST00000516655 271 ntBASIC4.34□□□□□ -1.71
SOX2P48431 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.34□□□□□ -1.71
SOX2P48431 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.34□□□□□ -1.71
SOX2P48431 GTF2IP22-201ENST00000554443 182 ntBASIC4.34□□□□□ -1.71
SOX2P48431 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.34□□□□□ -1.71
SOX2P48431 SULT1C2P1-202ENST00000562418 459 ntBASIC4.34□□□□□ -1.71
SOX2P48431 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.34□□□□□ -1.71
SOX2P48431 AC107982.3-201ENST00000584957 985 ntBASIC4.34□□□□□ -1.71
SOX2P48431 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.34□□□□□ -1.71
SOX2P48431 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.34□□□□□ -1.71
SOX2P48431 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.34□□□□□ -1.71
SOX2P48431 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.34□□□□□ -1.71
SOX2P48431 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SOX2P48431 AC243773.3-201ENST00000613270 256 ntBASIC4.34□□□□□ -1.71
SOX2P48431 AC100793.4-201ENST00000613683 429 ntBASIC4.34□□□□□ -1.71
SOX2P48431 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms