Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AL355379.1-201ENST00000405542 640 ntBASIC3.82□□□□□ -1.8
CDX1P47902 AL023807.1-201ENST00000407932 359 ntBASIC3.82□□□□□ -1.8
CDX1P47902 AC114755.2-201ENST00000413520 361 ntBASIC3.82□□□□□ -1.8
CDX1P47902 RPL31P2-201ENST00000413849 377 ntBASIC3.82□□□□□ -1.8
CDX1P47902 GTF2IP5-201ENST00000414608 731 ntBASIC3.82□□□□□ -1.8
CDX1P47902 RPS3AP37-201ENST00000419176 745 ntBASIC3.82□□□□□ -1.8
CDX1P47902 MTND2P16-201ENST00000419987 799 ntBASIC3.82□□□□□ -1.8
CDX1P47902 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.82□□□□□ -1.8
CDX1P47902 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.82□□□□□ -1.8
CDX1P47902 AL360081.1-201ENST00000428299 555 ntBASIC3.82□□□□□ -1.8
CDX1P47902 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.82□□□□□ -1.8
CDX1P47902 RPL7P28-201ENST00000437739 740 ntBASIC3.82□□□□□ -1.8
CDX1P47902 EEF1A1P39-201ENST00000440791 250 ntBASIC3.82□□□□□ -1.8
CDX1P47902 RRM2P4-201ENST00000441721 562 ntBASIC3.82□□□□□ -1.8
CDX1P47902 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.82□□□□□ -1.8
CDX1P47902 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.82□□□□□ -1.8
CDX1P47902 AC092155.2-201ENST00000454675 477 ntBASIC3.82□□□□□ -1.8
CDX1P47902 PTGES3P5-201ENST00000455109 434 ntBASIC3.82□□□□□ -1.8
CDX1P47902 MTCO3P2-201ENST00000457365 171 ntBASIC3.82□□□□□ -1.8
CDX1P47902 AL133477.1-201ENST00000457472 514 ntBASIC3.82□□□□□ -1.8
CDX1P47902 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC3.82□□□□□ -1.8
CDX1P47902 S100A11P1-201ENST00000477525 312 ntBASIC3.82□□□□□ -1.8
CDX1P47902 AC013828.1-201ENST00000481845 158 ntBASIC3.82□□□□□ -1.8
CDX1P47902 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDX1P47902 AC105233.1-201ENST00000498840 781 ntBASIC3.82□□□□□ -1.8
CDX1P47902 TRAV31-201ENST00000502780 342 ntBASIC3.82□□□□□ -1.8
CDX1P47902 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDX1P47902 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDX1P47902 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.82□□□□□ -1.8
CDX1P47902 Y_RNA.719-201ENST00000517156 106 ntBASIC3.82□□□□□ -1.8
CDX1P47902 AC087808.1-201ENST00000520501 361 ntBASIC3.82□□□□□ -1.8
CDX1P47902 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.82□□□□□ -1.8
CDX1P47902 AP000790.1-201ENST00000528891 737 ntBASIC3.82□□□□□ -1.8
CDX1P47902 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.82□□□□□ -1.8
CDX1P47902 OR4A45P-201ENST00000529954 901 ntBASIC3.82□□□□□ -1.8
CDX1P47902 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC3.82□□□□□ -1.8
CDX1P47902 OR6C73P-201ENST00000546432 358 ntBASIC3.82□□□□□ -1.8
CDX1P47902 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.82□□□□□ -1.8
CDX1P47902 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDX1P47902 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.82□□□□□ -1.8
CDX1P47902 AC073091.2-201ENST00000603205 907 ntBASIC3.82□□□□□ -1.8
CDX1P47902 AC020910.3-201ENST00000603701 874 ntBASIC3.82□□□□□ -1.8
CDX1P47902 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDX1P47902 AC121761.2-201ENST00000617300 689 ntBASIC3.82□□□□□ -1.8
CDX1P47902 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.82□□□□□ -1.8
CDX1P47902 AF001550.2-201ENST00000636643 217 ntBASIC3.82□□□□□ -1.8
CDX1P47902 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDX1P47902 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDX1P47902 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC3.82□□□□□ -1.8
CDX1P47902 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDX1P47902 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDX1P47902 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDX1P47902 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDX1P47902 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDX1P47902 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDX1P47902 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.81□□□□□ -1.8
CDX1P47902 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDX1P47902 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CDX1P47902 OR4A15-201ENST00000314706 1035 ntBASIC3.81□□□□□ -1.8
CDX1P47902 RNU4-68P-201ENST00000364314 141 ntBASIC3.81□□□□□ -1.8
CDX1P47902 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDX1P47902 RPL23AP47-201ENST00000408017 460 ntBASIC3.81□□□□□ -1.8
CDX1P47902 RNA5SP113-201ENST00000410486 84 ntBASIC3.81□□□□□ -1.8
CDX1P47902 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.81□□□□□ -1.8
CDX1P47902 AC092634.6-201ENST00000418558 192 ntBASIC3.81□□□□□ -1.8
CDX1P47902 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.81□□□□□ -1.8
CDX1P47902 KRR1P1-201ENST00000419430 803 ntBASIC3.81□□□□□ -1.8
CDX1P47902 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.81□□□□□ -1.8
CDX1P47902 MRPS36P1-201ENST00000421291 307 ntBASIC3.81□□□□□ -1.8
CDX1P47902 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.81□□□□□ -1.8
CDX1P47902 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.81□□□□□ -1.8
CDX1P47902 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.81□□□□□ -1.8
CDX1P47902 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.81□□□□□ -1.8
CDX1P47902 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.81□□□□□ -1.8
CDX1P47902 NANOGP2-201ENST00000435391 727 ntBASIC3.81□□□□□ -1.8
CDX1P47902 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.81□□□□□ -1.8
CDX1P47902 RPL23AP16-201ENST00000441715 421 ntBASIC3.81□□□□□ -1.8
CDX1P47902 TDGF1P1-201ENST00000445734 527 ntBASIC3.81□□□□□ -1.8
CDX1P47902 AL590399.6-201ENST00000446396 307 ntBASIC3.81□□□□□ -1.8
CDX1P47902 EIF2S2P2-201ENST00000447161 982 ntBASIC3.81□□□□□ -1.8
CDX1P47902 OR1H1P-201ENST00000448731 937 ntBASIC3.81□□□□□ -1.8
CDX1P47902 ZNF886P-201ENST00000450781 723 ntBASIC3.81□□□□□ -1.8
CDX1P47902 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.81□□□□□ -1.8
CDX1P47902 AURKAPS2-201ENST00000454983 333 ntBASIC3.81□□□□□ -1.8
CDX1P47902 AC063943.1-201ENST00000465434 453 ntBASIC3.81□□□□□ -1.8
CDX1P47902 AC108734.3-201ENST00000481241 1165 ntBASIC3.81□□□□□ -1.8
CDX1P47902 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.81□□□□□ -1.8
CDX1P47902 AC139783.2-201ENST00000504847 1145 ntBASIC3.81□□□□□ -1.8
CDX1P47902 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.81□□□□□ -1.8
CDX1P47902 RNU2-30P-201ENST00000516209 141 ntBASIC3.81□□□□□ -1.8
CDX1P47902 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.81□□□□□ -1.8
CDX1P47902 IGLV3-26-201ENST00000520756 302 ntBASIC3.81□□□□□ -1.8
CDX1P47902 ZNF705CP-201ENST00000530515 889 ntBASIC3.81□□□□□ -1.8
CDX1P47902 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.81□□□□□ -1.8
CDX1P47902 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.81□□□□□ -1.8
CDX1P47902 AL132857.1-201ENST00000555180 708 ntBASIC3.81□□□□□ -1.8
CDX1P47902 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.81□□□□□ -1.8
CDX1P47902 UBE2FP2-201ENST00000566646 462 ntBASIC3.81□□□□□ -1.8
CDX1P47902 MIR3667-201ENST00000581025 74 ntBASIC3.81□□□□□ -1.8
CDX1P47902 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms