Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 MIR217-201ENST00000384817 110 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 MIR3065-201ENST00000390137 79 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 AL512430.2-201ENST00000406786 339 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 RPL37P18-201ENST00000411602 243 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 AC009237.10-201ENST00000414112 510 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.63□□□□□ -1.67
PTPN9P43378 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.63□□□□□ -1.67
PTPN9P43378 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.63□□□□□ -1.67
PTPN9P43378 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.63□□□□□ -1.67
PTPN9P43378 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PTPN9P43378 UBE2V1P3-201ENST00000439651 417 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.63□□□□□ -1.67
PTPN9P43378 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 MTCO2P25-201ENST00000447065 681 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.63□□□□□ -1.67
PTPN9P43378 RPS27AP17-201ENST00000463344 455 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 RPL5P24-201ENST00000463742 885 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 DYNLL1P6-201ENST00000503440 264 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 AC091951.3-201ENST00000504093 246 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 AC111000.3-201ENST00000508057 576 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 MTCYBP16-201ENST00000509187 1129 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 AC021146.3-201ENST00000511911 260 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 RNA5SP228-201ENST00000516232 133 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 CDH12P4-201ENST00000517835 295 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 CDH12P3-201ENST00000517935 295 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.63□□□□□ -1.67
PTPN9P43378 CDH12P1-201ENST00000518435 295 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.63□□□□□ -1.67
PTPN9P43378 C1GALT1P3-201ENST00000522049 819 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 OR4A2P-201ENST00000527276 913 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PTPN9P43378 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.63□□□□□ -1.67
PTPN9P43378 AC107918.3-201ENST00000533272 382 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.63□□□□□ -1.67
PTPN9P43378 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.63□□□□□ -1.67
PTPN9P43378 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PTPN9P43378 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.63□□□□□ -1.67
PTPN9P43378 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.63□□□□□ -1.67
PTPN9P43378 AL354943.1-201ENST00000572103 781 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.63□□□□□ -1.67
PTPN9P43378 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
PTPN9P43378 AC234771.5-201ENST00000600161 514 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 BNIP3P26-201ENST00000600827 554 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 AC021171.1-201ENST00000603137 706 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.63□□□□□ -1.67
PTPN9P43378 AC009704.2-201ENST00000618739 483 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
PTPN9P43378 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.63□□□□□ -1.67
PTPN9P43378 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.63□□□□□ -1.67
PTPN9P43378 AC010300.1-201ENST00000600671 5134 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PTPN9P43378 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
PTPN9P43378 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PTPN9P43378 AC093535.2-201ENST00000624769 2326 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PTPN9P43378 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
PTPN9P43378 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PTPN9P43378 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PTPN9P43378 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
PTPN9P43378 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PTPN9P43378 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
PTPN9P43378 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PTPN9P43378 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PTPN9P43378 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PTPN9P43378 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.62□□□□□ -1.67
PTPN9P43378 AL451142.2-201ENST00000429076 2090 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 SCN1A-220ENST00000641603 12506 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PTPN9P43378 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
PTPN9P43378 RNU1-130P-201ENST00000363930 160 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 MIR585-201ENST00000384887 94 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 SNORD65.1-201ENST00000390889 71 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 GSTA8P-201ENST00000404253 637 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 PAICSP7-201ENST00000419829 962 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.62□□□□□ -1.67
PTPN9P43378 Z93242.1-201ENST00000427102 353 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.62□□□□□ -1.67
PTPN9P43378 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.62□□□□□ -1.67
PTPN9P43378 RPS26P40-201ENST00000435209 294 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 PPIAP17-201ENST00000438507 471 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.62□□□□□ -1.67
PTPN9P43378 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.62□□□□□ -1.67
PTPN9P43378 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.62□□□□□ -1.67
PTPN9P43378 DHFRP3-201ENST00000455595 559 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 ANKRD26P4-201ENST00000455755 950 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 AC005008.1-201ENST00000456151 612 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.62□□□□□ -1.67
PTPN9P43378 RPL7AP28-201ENST00000464513 571 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.62□□□□□ -1.67
PTPN9P43378 AK3P4-201ENST00000504283 583 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.62□□□□□ -1.67
PTPN9P43378 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.62□□□□□ -1.67
PTPN9P43378 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.62□□□□□ -1.67
PTPN9P43378 AC048346.1-201ENST00000510247 144 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 FABP5P12-201ENST00000515543 389 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 RN7SKP92-201ENST00000517266 244 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 NPM1P6-201ENST00000521088 871 ntBASIC4.62□□□□□ -1.67
PTPN9P43378 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.62□□□□□ -1.67
PTPN9P43378 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms