Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 RNU4-27P-201ENST00000410889 139 ntBASIC4.06□□□□□ -1.76
TRIM23P36406 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM23P36406 AL159169.1-201ENST00000421119 127 ntBASIC4.06□□□□□ -1.76
TRIM23P36406 AC017083.1-201ENST00000428093 483 ntBASIC4.06□□□□□ -1.76
TRIM23P36406 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM23P36406 AP000949.1-201ENST00000438328 629 ntBASIC4.06□□□□□ -1.76
TRIM23P36406 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM23P36406 AL162151.2-201ENST00000448875 158 ntBASIC4.06□□□□□ -1.76
TRIM23P36406 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM23P36406 HMGN2P7-201ENST00000456186 273 ntBASIC4.06□□□□□ -1.76
TRIM23P36406 RPL23AP71-201ENST00000470966 469 ntBASIC4.06□□□□□ -1.76
TRIM23P36406 RPL21P47-201ENST00000483696 477 ntBASIC4.06□□□□□ -1.76
TRIM23P36406 RPL30P11-201ENST00000495304 339 ntBASIC4.06□□□□□ -1.76
TRIM23P36406 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM23P36406 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM23P36406 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.06□□□□□ -1.76
TRIM23P36406 MTND1P36-201ENST00000522384 936 ntBASIC4.06□□□□□ -1.76
TRIM23P36406 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM23P36406 OR5AK3P-201ENST00000527486 1297 ntBASIC4.06□□□□□ -1.76
TRIM23P36406 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM23P36406 AC092451.2-201ENST00000538746 658 ntBASIC4.06□□□□□ -1.76
TRIM23P36406 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM23P36406 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM23P36406 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM23P36406 AC124068.1-201ENST00000563131 678 ntBASIC4.06□□□□□ -1.76
TRIM23P36406 AC093227.2-201ENST00000589357 285 ntBASIC4.06□□□□□ -1.76
TRIM23P36406 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.06□□□□□ -1.76
TRIM23P36406 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM23P36406 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM23P36406 AC064801.1-201ENST00000612025 407 ntBASIC4.06□□□□□ -1.76
TRIM23P36406 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
TRIM23P36406 CDRT1-208ENST00000630868 794 ntBASIC4.06□□□□□ -1.76
TRIM23P36406 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
TRIM23P36406 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM23P36406 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM23P36406 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM23P36406 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM23P36406 AC022031.1-201ENST00000585985 2593 ntBASIC4.06□□□□□ -1.76
TRIM23P36406 MTCO1P18-201ENST00000455518 1419 ntBASIC4.05□□□□□ -1.76
TRIM23P36406 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM23P36406 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM23P36406 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM23P36406 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TRIM23P36406 RNU6-796P-201ENST00000391086 107 ntBASIC4.05□□□□□ -1.76
TRIM23P36406 HSPE1P12-201ENST00000412576 301 ntBASIC4.05□□□□□ -1.76
TRIM23P36406 HMGB3P31-201ENST00000413333 595 ntBASIC4.05□□□□□ -1.76
TRIM23P36406 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM23P36406 PTP4A1P5-201ENST00000420305 455 ntBASIC4.05□□□□□ -1.76
TRIM23P36406 AC023128.2-201ENST00000420880 1223 ntBASIC4.05□□□□□ -1.76
TRIM23P36406 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.05□□□□□ -1.76
TRIM23P36406 AC093422.3-201ENST00000428506 305 ntBASIC4.05□□□□□ -1.76
TRIM23P36406 AL358472.1-201ENST00000431295 329 ntBASIC4.05□□□□□ -1.76
TRIM23P36406 BMS1P19-201ENST00000433925 393 ntBASIC4.05□□□□□ -1.76
TRIM23P36406 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM23P36406 AC018635.1-201ENST00000468292 1030 ntBASIC4.05□□□□□ -1.76
TRIM23P36406 FTH1P24-201ENST00000503502 462 ntBASIC4.05□□□□□ -1.76
TRIM23P36406 AC121161.1-201ENST00000510606 652 ntBASIC4.05□□□□□ -1.76
TRIM23P36406 HNRNPKP5-201ENST00000515300 253 ntBASIC4.05□□□□□ -1.76
TRIM23P36406 MIR2114-201ENST00000516645 80 ntBASIC4.05□□□□□ -1.76
TRIM23P36406 COX6B1P6-201ENST00000522347 255 ntBASIC4.05□□□□□ -1.76
TRIM23P36406 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.05□□□□□ -1.76
TRIM23P36406 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM23P36406 AC090751.1-201ENST00000566966 267 ntBASIC4.05□□□□□ -1.76
TRIM23P36406 MIR5684-201ENST00000585074 65 ntBASIC4.05□□□□□ -1.76
TRIM23P36406 AC015911.5-201ENST00000587076 451 ntBASIC4.05□□□□□ -1.76
TRIM23P36406 AC022916.3-201ENST00000592961 742 ntBASIC4.05□□□□□ -1.76
TRIM23P36406 ABI1P1-201ENST00000603375 1120 ntBASIC4.05□□□□□ -1.76
TRIM23P36406 AL158211.2-201ENST00000607282 395 ntBASIC4.05□□□□□ -1.76
TRIM23P36406 AC092574.1-201ENST00000609771 420 ntBASIC4.05□□□□□ -1.76
TRIM23P36406 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM23P36406 AC004943.3-201ENST00000624116 600 ntBASIC4.05□□□□□ -1.76
TRIM23P36406 ATE1-AS1-202ENST00000636460 506 ntBASIC4.05□□□□□ -1.76
TRIM23P36406 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM23P36406 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM23P36406 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM23P36406 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM23P36406 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM23P36406 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM23P36406 SAGE2P-201ENST00000420011 2126 ntBASIC4.04□□□□□ -1.76
TRIM23P36406 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM23P36406 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM23P36406 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM23P36406 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM23P36406 RNA5SP388-201ENST00000362584 119 ntBASIC4.04□□□□□ -1.76
TRIM23P36406 SNORD56.4-201ENST00000363883 71 ntBASIC4.04□□□□□ -1.76
TRIM23P36406 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.04□□□□□ -1.76
TRIM23P36406 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
TRIM23P36406 OR52E6-202ENST00000379946 954 ntBASIC4.04□□□□□ -1.76
TRIM23P36406 MIR1303-201ENST00000408625 86 ntBASIC4.04□□□□□ -1.76
TRIM23P36406 RNU6-628P-201ENST00000410675 107 ntBASIC4.04□□□□□ -1.76
TRIM23P36406 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM23P36406 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM23P36406 MTND2P15-201ENST00000418575 892 ntBASIC4.04□□□□□ -1.76
TRIM23P36406 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM23P36406 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC4.04□□□□□ -1.76
TRIM23P36406 OR8F1P-201ENST00000425243 930 ntBASIC4.04□□□□□ -1.76
TRIM23P36406 AL512637.2-201ENST00000431287 1256 ntBASIC4.04□□□□□ -1.76
TRIM23P36406 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.04□□□□□ -1.76
TRIM23P36406 AL512661.1-201ENST00000434586 1253 ntBASIC4.04□□□□□ -1.76
TRIM23P36406 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms