Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.63□□□□□ -1.83
RPA3P35244 MIR4644-201ENST00000579929 84 ntBASIC3.63□□□□□ -1.83
RPA3P35244 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.63□□□□□ -1.83
RPA3P35244 VN1R84P-201ENST00000593697 235 ntBASIC3.63□□□□□ -1.83
RPA3P35244 BNIP3P38-201ENST00000601117 544 ntBASIC3.63□□□□□ -1.83
RPA3P35244 AL137246.1-201ENST00000607072 977 ntBASIC3.63□□□□□ -1.83
RPA3P35244 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.63□□□□□ -1.83
RPA3P35244 AL357559.1-201ENST00000622228 274 ntBASIC3.63□□□□□ -1.83
RPA3P35244 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.63□□□□□ -1.83
RPA3P35244 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RPA3P35244 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
RPA3P35244 AC008725.1-201ENST00000605123 2263 ntBASIC3.63□□□□□ -1.83
RPA3P35244 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RPA3P35244 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.63□□□□□ -1.83
RPA3P35244 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RPA3P35244 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RPA3P35244 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.62□□□□□ -1.83
RPA3P35244 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.62□□□□□ -1.83
RPA3P35244 AC058791.1-201ENST00000608412 3198 ntBASIC3.62□□□□□ -1.83
RPA3P35244 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RPA3P35244 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RPA3P35244 RNU6-386P-201ENST00000362650 107 ntBASIC3.62□□□□□ -1.83
RPA3P35244 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
RPA3P35244 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RPA3P35244 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.62□□□□□ -1.83
RPA3P35244 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.62□□□□□ -1.83
RPA3P35244 RN7SKP202-201ENST00000410439 330 ntBASIC3.62□□□□□ -1.83
RPA3P35244 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.62□□□□□ -1.83
RPA3P35244 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.62□□□□□ -1.83
RPA3P35244 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.62□□□□□ -1.83
RPA3P35244 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.62□□□□□ -1.83
RPA3P35244 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.62□□□□□ -1.83
RPA3P35244 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RPA3P35244 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.62□□□□□ -1.83
RPA3P35244 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.62□□□□□ -1.83
RPA3P35244 RPL23AP14-201ENST00000468281 468 ntBASIC3.62□□□□□ -1.83
RPA3P35244 NIPA2P2-201ENST00000496376 1083 ntBASIC3.62□□□□□ -1.83
RPA3P35244 AC020893.1-201ENST00000502452 580 ntBASIC3.62□□□□□ -1.83
RPA3P35244 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.62□□□□□ -1.83
RPA3P35244 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.62□□□□□ -1.83
RPA3P35244 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.62□□□□□ -1.83
RPA3P35244 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.62□□□□□ -1.83
RPA3P35244 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.62□□□□□ -1.83
RPA3P35244 AL732618.1-201ENST00000623251 301 ntBASIC3.62□□□□□ -1.83
RPA3P35244 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
RPA3P35244 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
RPA3P35244 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RPA3P35244 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.61□□□□□ -1.83
RPA3P35244 Y_RNA.126-201ENST00000363382 111 ntBASIC3.61□□□□□ -1.83
RPA3P35244 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.61□□□□□ -1.83
RPA3P35244 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.61□□□□□ -1.83
RPA3P35244 RN7SKP159-201ENST00000410657 292 ntBASIC3.61□□□□□ -1.83
RPA3P35244 CYCSP19-201ENST00000411715 316 ntBASIC3.61□□□□□ -1.83
RPA3P35244 MTND4P22-201ENST00000413116 1169 ntBASIC3.61□□□□□ -1.83
RPA3P35244 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RPA3P35244 RPS6P12-201ENST00000432491 726 ntBASIC3.61□□□□□ -1.83
RPA3P35244 BX679664.1-201ENST00000434429 253 ntBASIC3.61□□□□□ -1.83
RPA3P35244 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.61□□□□□ -1.83
RPA3P35244 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.61□□□□□ -1.83
RPA3P35244 ANP32BP2-201ENST00000454525 545 ntBASIC3.61□□□□□ -1.83
RPA3P35244 AC010683.1-201ENST00000473673 378 ntBASIC3.61□□□□□ -1.83
RPA3P35244 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.61□□□□□ -1.83
RPA3P35244 AC067904.2-201ENST00000517322 1283 ntBASIC3.61□□□□□ -1.83
RPA3P35244 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.61□□□□□ -1.83
RPA3P35244 HIGD1AP18-201ENST00000520730 278 ntBASIC3.61□□□□□ -1.83
RPA3P35244 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.61□□□□□ -1.83
RPA3P35244 AC135001.1-201ENST00000544546 283 ntBASIC3.61□□□□□ -1.83
RPA3P35244 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.61□□□□□ -1.83
RPA3P35244 AL109741.3-201ENST00000561748 592 ntBASIC3.61□□□□□ -1.83
RPA3P35244 MIR4512-201ENST00000583257 77 ntBASIC3.61□□□□□ -1.83
RPA3P35244 AC093227.2-201ENST00000589357 285 ntBASIC3.61□□□□□ -1.83
RPA3P35244 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPA3P35244 AC007423.1-201ENST00000605009 627 ntBASIC3.61□□□□□ -1.83
RPA3P35244 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPA3P35244 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPA3P35244 AC022149.2-201ENST00000621061 203 ntBASIC3.61□□□□□ -1.83
RPA3P35244 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.61□□□□□ -1.83
RPA3P35244 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPA3P35244 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPA3P35244 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPA3P35244 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPA3P35244 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPA3P35244 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPA3P35244 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPA3P35244 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
RPA3P35244 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
RPA3P35244 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RPA3P35244 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.6□□□□□ -1.83
RPA3P35244 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RPA3P35244 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.6□□□□□ -1.83
RPA3P35244 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RPA3P35244 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RPA3P35244 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.6□□□□□ -1.83
RPA3P35244 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RPA3P35244 HMGB3P18-201ENST00000406327 590 ntBASIC3.6□□□□□ -1.83
RPA3P35244 LIPT1P1-201ENST00000415870 1186 ntBASIC3.6□□□□□ -1.83
RPA3P35244 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.6□□□□□ -1.83
RPA3P35244 RPS12P23-201ENST00000419579 400 ntBASIC3.6□□□□□ -1.83
RPA3P35244 SDCBPP2-201ENST00000424643 885 ntBASIC3.6□□□□□ -1.83
RPA3P35244 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms