Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 CBX3P5-201ENST00000552017 521 ntBASIC4.54□□□□□ -1.68
HOXC13P31276 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.54□□□□□ -1.68
HOXC13P31276 MIR4444-1-201ENST00000581696 74 ntBASIC4.54□□□□□ -1.68
HOXC13P31276 MIR4444-2-201ENST00000584390 74 ntBASIC4.54□□□□□ -1.68
HOXC13P31276 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC13P31276 AC008759.1-201ENST00000589783 983 ntBASIC4.54□□□□□ -1.68
HOXC13P31276 SLC25A36P1-201ENST00000590111 465 ntBASIC4.54□□□□□ -1.68
HOXC13P31276 AL160290.3-201ENST00000604869 165 ntBASIC4.54□□□□□ -1.68
HOXC13P31276 AL049634.3-201ENST00000604968 457 ntBASIC4.54□□□□□ -1.68
HOXC13P31276 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
HOXC13P31276 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXC13P31276 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC13P31276 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC13P31276 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
HOXC13P31276 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HOXC13P31276 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC13P31276 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HOXC13P31276 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.54□□□□□ -1.68
HOXC13P31276 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXC13P31276 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXC13P31276 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC13P31276 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC13P31276 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC13P31276 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC13P31276 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC13P31276 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXC13P31276 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXC13P31276 SNORA70.4-201ENST00000365509 134 ntBASIC4.53□□□□□ -1.68
HOXC13P31276 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.53□□□□□ -1.68
HOXC13P31276 RNA5SP372-201ENST00000390836 115 ntBASIC4.53□□□□□ -1.68
HOXC13P31276 AC069218.2-201ENST00000411665 344 ntBASIC4.53□□□□□ -1.68
HOXC13P31276 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXC13P31276 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HOXC13P31276 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXC13P31276 RPS27AP15-201ENST00000447672 466 ntBASIC4.53□□□□□ -1.68
HOXC13P31276 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXC13P31276 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXC13P31276 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXC13P31276 snoU13.7-201ENST00000459220 104 ntBASIC4.53□□□□□ -1.68
HOXC13P31276 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXC13P31276 PARP4P3-201ENST00000510265 317 ntBASIC4.53□□□□□ -1.68
HOXC13P31276 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXC13P31276 RNU2-58P-201ENST00000516403 183 ntBASIC4.53□□□□□ -1.68
HOXC13P31276 RNU1-45P-201ENST00000517191 141 ntBASIC4.53□□□□□ -1.68
HOXC13P31276 AC026407.1-201ENST00000518369 204 ntBASIC4.53□□□□□ -1.68
HOXC13P31276 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.53□□□□□ -1.68
HOXC13P31276 AC139103.1-201ENST00000534696 1030 ntBASIC4.53□□□□□ -1.68
HOXC13P31276 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC13P31276 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXC13P31276 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXC13P31276 Z98200.1-201ENST00000607298 470 ntBASIC4.53□□□□□ -1.68
HOXC13P31276 AC084782.3-201ENST00000612282 578 ntBASIC4.53□□□□□ -1.68
HOXC13P31276 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HOXC13P31276 AC018926.3-201ENST00000618841 406 ntBASIC4.53□□□□□ -1.68
HOXC13P31276 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXC13P31276 MIR492-201ENST00000638676 116 ntBASIC4.53□□□□□ -1.68
HOXC13P31276 OR6C71P-202ENST00000641886 1107 ntBASIC4.53□□□□□ -1.68
HOXC13P31276 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC13P31276 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC13P31276 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
HOXC13P31276 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXC13P31276 AL158163.1-201ENST00000603915 1649 ntBASIC4.53□□□□□ -1.68
HOXC13P31276 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXC13P31276 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC13P31276 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
HOXC13P31276 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
HOXC13P31276 MAPK10-372ENST00000641954 3413 ntBASIC4.52□□□□□ -1.69
HOXC13P31276 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXC13P31276 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXC13P31276 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXC13P31276 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
HOXC13P31276 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXC13P31276 MIR383-201ENST00000362257 73 ntBASIC4.52□□□□□ -1.69
HOXC13P31276 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXC13P31276 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXC13P31276 RNU2-21P-201ENST00000410368 188 ntBASIC4.52□□□□□ -1.69
HOXC13P31276 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.52□□□□□ -1.69
HOXC13P31276 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXC13P31276 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HOXC13P31276 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXC13P31276 OR51AB1P-201ENST00000429046 620 ntBASIC4.52□□□□□ -1.69
HOXC13P31276 RPL7P4-203ENST00000430239 730 ntBASIC4.52□□□□□ -1.69
HOXC13P31276 AL117339.2-201ENST00000430475 180 ntBASIC4.52□□□□□ -1.69
HOXC13P31276 UBE2V1P1-201ENST00000430836 445 ntBASIC4.52□□□□□ -1.69
HOXC13P31276 UBE2V1P6-201ENST00000430840 422 ntBASIC4.52□□□□□ -1.69
HOXC13P31276 AL512637.2-201ENST00000431287 1256 ntBASIC4.52□□□□□ -1.69
HOXC13P31276 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXC13P31276 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXC13P31276 CKS1BP5-201ENST00000434172 273 ntBASIC4.52□□□□□ -1.69
HOXC13P31276 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.52□□□□□ -1.69
HOXC13P31276 UBE2V1P5-201ENST00000440070 405 ntBASIC4.52□□□□□ -1.69
HOXC13P31276 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.52□□□□□ -1.69
HOXC13P31276 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.52□□□□□ -1.69
HOXC13P31276 RN7SL812P-201ENST00000493791 279 ntBASIC4.52□□□□□ -1.69
HOXC13P31276 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXC13P31276 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXC13P31276 AC008885.2-201ENST00000509506 930 ntBASIC4.52□□□□□ -1.69
HOXC13P31276 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HOXC13P31276 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.52□□□□□ -1.69
HOXC13P31276 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms