Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC090666.1-201ENST00000578241 445 ntBASIC4.56□□□□□ -1.68
HOXC8P31273 AC233280.2-201ENST00000603917 1070 ntBASIC4.56□□□□□ -1.68
HOXC8P31273 AC069304.3-201ENST00000603938 1084 ntBASIC4.56□□□□□ -1.68
HOXC8P31273 LINC00901.1-201ENST00000617252 152 ntBASIC4.56□□□□□ -1.68
HOXC8P31273 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HOXC8P31273 AP006248.2-201ENST00000623309 592 ntBASIC4.56□□□□□ -1.68
HOXC8P31273 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXC8P31273 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HOXC8P31273 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXC8P31273 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.56□□□□□ -1.68
HOXC8P31273 AL672167.1-203ENST00000641299 2975 ntBASIC4.56□□□□□ -1.68
HOXC8P31273 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.56□□□□□ -1.68
HOXC8P31273 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXC8P31273 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
HOXC8P31273 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
HOXC8P31273 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HOXC8P31273 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HOXC8P31273 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXC8P31273 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
HOXC8P31273 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.55□□□□□ -1.68
HOXC8P31273 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HOXC8P31273 RNU1-87P-201ENST00000363727 170 ntBASIC4.55□□□□□ -1.68
HOXC8P31273 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HOXC8P31273 HSPE1P12-201ENST00000412576 301 ntBASIC4.55□□□□□ -1.68
HOXC8P31273 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.55□□□□□ -1.68
HOXC8P31273 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXC8P31273 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.55□□□□□ -1.68
HOXC8P31273 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.55□□□□□ -1.68
HOXC8P31273 USP12PY-201ENST00000427677 1064 ntBASIC4.55□□□□□ -1.68
HOXC8P31273 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.55□□□□□ -1.68
HOXC8P31273 UBE2V1P5-201ENST00000440070 405 ntBASIC4.55□□□□□ -1.68
HOXC8P31273 AL096829.2-201ENST00000446582 742 ntBASIC4.55□□□□□ -1.68
HOXC8P31273 AL096803.2-201ENST00000450032 677 ntBASIC4.55□□□□□ -1.68
HOXC8P31273 AC022795.1-201ENST00000473808 480 ntBASIC4.55□□□□□ -1.68
HOXC8P31273 AC104982.1-201ENST00000478775 574 ntBASIC4.55□□□□□ -1.68
HOXC8P31273 RNU1-45P-201ENST00000517191 141 ntBASIC4.55□□□□□ -1.68
HOXC8P31273 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXC8P31273 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.55□□□□□ -1.68
HOXC8P31273 MTND1P24-201ENST00000552175 861 ntBASIC4.55□□□□□ -1.68
HOXC8P31273 HSPE1P5-201ENST00000561489 272 ntBASIC4.55□□□□□ -1.68
HOXC8P31273 AC053481.3-201ENST00000577881 843 ntBASIC4.55□□□□□ -1.68
HOXC8P31273 MIR5684-201ENST00000585074 65 ntBASIC4.55□□□□□ -1.68
HOXC8P31273 AC008759.1-201ENST00000589783 983 ntBASIC4.55□□□□□ -1.68
HOXC8P31273 AL392112.1-201ENST00000605115 829 ntBASIC4.55□□□□□ -1.68
HOXC8P31273 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.55□□□□□ -1.68
HOXC8P31273 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.55□□□□□ -1.68
HOXC8P31273 AC007275.1-201ENST00000621243 671 ntBASIC4.55□□□□□ -1.68
HOXC8P31273 MIR6500-201ENST00000622700 86 ntBASIC4.55□□□□□ -1.68
HOXC8P31273 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXC8P31273 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXC8P31273 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXC8P31273 AC013437.2-201ENST00000639587 677 ntBASIC4.55□□□□□ -1.68
HOXC8P31273 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
HOXC8P31273 SAGE2P-201ENST00000420011 2126 ntBASIC4.55□□□□□ -1.68
HOXC8P31273 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXC8P31273 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HOXC8P31273 ERCC6-202ENST00000374127 1782 ntBASIC4.55□□□□□ -1.68
HOXC8P31273 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.55□□□□□ -1.68
HOXC8P31273 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
HOXC8P31273 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HOXC8P31273 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC8P31273 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.54□□□□□ -1.68
HOXC8P31273 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
HOXC8P31273 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXC8P31273 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXC8P31273 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC8P31273 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC8P31273 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC8P31273 AL672167.1-205ENST00000641112 3080 ntBASIC4.54□□□□□ -1.68
HOXC8P31273 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC8P31273 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXC8P31273 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.54□□□□□ -1.68
HOXC8P31273 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXC8P31273 MTCO2P23-201ENST00000425216 680 ntBASIC4.54□□□□□ -1.68
HOXC8P31273 DEFB130D-201ENST00000426866 237 ntBASIC4.54□□□□□ -1.68
HOXC8P31273 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.54□□□□□ -1.68
HOXC8P31273 RPL7P2-201ENST00000427639 268 ntBASIC4.54□□□□□ -1.68
HOXC8P31273 RPL7P4-203ENST00000430239 730 ntBASIC4.54□□□□□ -1.68
HOXC8P31273 AL445584.1-201ENST00000431451 330 ntBASIC4.54□□□□□ -1.68
HOXC8P31273 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.54□□□□□ -1.68
HOXC8P31273 RPL37P1-201ENST00000432310 284 ntBASIC4.54□□□□□ -1.68
HOXC8P31273 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXC8P31273 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXC8P31273 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXC8P31273 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HOXC8P31273 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXC8P31273 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXC8P31273 RNA5SP103-201ENST00000459503 118 ntBASIC4.54□□□□□ -1.68
HOXC8P31273 AC034236.1-201ENST00000469891 373 ntBASIC4.54□□□□□ -1.68
HOXC8P31273 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.54□□□□□ -1.68
HOXC8P31273 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.54□□□□□ -1.68
HOXC8P31273 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.54□□□□□ -1.68
HOXC8P31273 MTND4LP31-201ENST00000514859 294 ntBASIC4.54□□□□□ -1.68
HOXC8P31273 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXC8P31273 RN7SKP46-201ENST00000515942 234 ntBASIC4.54□□□□□ -1.68
HOXC8P31273 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXC8P31273 PHBP17-201ENST00000528576 541 ntBASIC4.54□□□□□ -1.68
HOXC8P31273 AC139103.1-201ENST00000534696 1030 ntBASIC4.54□□□□□ -1.68
HOXC8P31273 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXC8P31273 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 156.8 ms