Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC243312.2-201ENST00000623340 601 ntBASIC3.95□□□□□ -1.78
HOXA9P31269 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
HOXA9P31269 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
HOXA9P31269 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXA9P31269 MTCO1P12-201ENST00000414273 1543 ntBASIC3.95□□□□□ -1.78
HOXA9P31269 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXA9P31269 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA9P31269 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
HOXA9P31269 MTND5P1-201ENST00000445440 1375 ntBASIC3.94□□□□□ -1.78
HOXA9P31269 AL118496.1-201ENST00000440201 1812 ntBASIC3.94□□□□□ -1.78
HOXA9P31269 RNU6-670P-201ENST00000364312 104 ntBASIC3.94□□□□□ -1.78
HOXA9P31269 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA9P31269 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXA9P31269 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXA9P31269 MIR218-2-201ENST00000385006 110 ntBASIC3.94□□□□□ -1.78
HOXA9P31269 AL034403.1-201ENST00000399414 885 ntBASIC3.94□□□□□ -1.78
HOXA9P31269 AC245052.5-201ENST00000416320 649 ntBASIC3.94□□□□□ -1.78
HOXA9P31269 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXA9P31269 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXA9P31269 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA9P31269 VN1R25P-201ENST00000443385 738 ntBASIC3.94□□□□□ -1.78
HOXA9P31269 RAD1P2-201ENST00000446414 663 ntBASIC3.94□□□□□ -1.78
HOXA9P31269 VN1R40P-201ENST00000455196 941 ntBASIC3.94□□□□□ -1.78
HOXA9P31269 snoU13.24-201ENST00000458998 104 ntBASIC3.94□□□□□ -1.78
HOXA9P31269 HMGN1P8-201ENST00000463578 288 ntBASIC3.94□□□□□ -1.78
HOXA9P31269 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.94□□□□□ -1.78
HOXA9P31269 SNORA70.17-201ENST00000516449 133 ntBASIC3.94□□□□□ -1.78
HOXA9P31269 RANP9-201ENST00000519957 271 ntBASIC3.94□□□□□ -1.78
HOXA9P31269 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.94□□□□□ -1.78
HOXA9P31269 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.94□□□□□ -1.78
HOXA9P31269 FAM60CP-201ENST00000591086 664 ntBASIC3.94□□□□□ -1.78
HOXA9P31269 AC244505.7-201ENST00000599675 272 ntBASIC3.94□□□□□ -1.78
HOXA9P31269 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXA9P31269 AP000255.1-201ENST00000610276 676 ntBASIC3.94□□□□□ -1.78
HOXA9P31269 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXA9P31269 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXA9P31269 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXA9P31269 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXA9P31269 ATE1-AS1-202ENST00000636460 506 ntBASIC3.94□□□□□ -1.78
HOXA9P31269 AC244258.1-201ENST00000637553 1071 ntBASIC3.94□□□□□ -1.78
HOXA9P31269 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA9P31269 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXA9P31269 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.94□□□□□ -1.78
HOXA9P31269 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA9P31269 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HOXA9P31269 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXA9P31269 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA9P31269 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXA9P31269 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXA9P31269 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HOXA9P31269 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.93□□□□□ -1.78
HOXA9P31269 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXA9P31269 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HOXA9P31269 MT-TP-201ENST00000387461 68 ntBASIC3.93□□□□□ -1.78
HOXA9P31269 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXA9P31269 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.93□□□□□ -1.78
HOXA9P31269 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXA9P31269 SYT14P1-201ENST00000481459 721 ntBASIC3.93□□□□□ -1.78
HOXA9P31269 AL358832.1-201ENST00000497800 389 ntBASIC3.93□□□□□ -1.78
HOXA9P31269 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXA9P31269 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.93□□□□□ -1.78
HOXA9P31269 AC074250.1-201ENST00000511117 192 ntBASIC3.93□□□□□ -1.78
HOXA9P31269 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.93□□□□□ -1.78
HOXA9P31269 AC022790.1-201ENST00000522872 204 ntBASIC3.93□□□□□ -1.78
HOXA9P31269 OR5B10P-201ENST00000532869 642 ntBASIC3.93□□□□□ -1.78
HOXA9P31269 AL360157.1-201ENST00000565962 87 ntBASIC3.93□□□□□ -1.78
HOXA9P31269 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXA9P31269 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.93□□□□□ -1.78
HOXA9P31269 MIR3922-201ENST00000585192 84 ntBASIC3.93□□□□□ -1.78
HOXA9P31269 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.93□□□□□ -1.78
HOXA9P31269 AC068020.1-201ENST00000594215 661 ntBASIC3.93□□□□□ -1.78
HOXA9P31269 AC084373.1-201ENST00000603311 235 ntBASIC3.93□□□□□ -1.78
HOXA9P31269 ELOCP35-201ENST00000604289 336 ntBASIC3.93□□□□□ -1.78
HOXA9P31269 AC007620.3-201ENST00000608131 497 ntBASIC3.93□□□□□ -1.78
HOXA9P31269 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.93□□□□□ -1.78
HOXA9P31269 AC016911.1-201ENST00000613297 452 ntBASIC3.93□□□□□ -1.78
HOXA9P31269 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXA9P31269 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.93□□□□□ -1.78
HOXA9P31269 AC083899.2-201ENST00000423285 1376 ntBASIC3.92□□□□□ -1.78
HOXA9P31269 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXA9P31269 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXA9P31269 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXA9P31269 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
HOXA9P31269 RNU6-525P-201ENST00000363685 104 ntBASIC3.92□□□□□ -1.78
HOXA9P31269 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXA9P31269 AC008280.1-201ENST00000418851 412 ntBASIC3.92□□□□□ -1.78
HOXA9P31269 NPM1P24-201ENST00000428039 894 ntBASIC3.92□□□□□ -1.78
HOXA9P31269 AC011742.1-201ENST00000431448 434 ntBASIC3.92□□□□□ -1.78
HOXA9P31269 TPTE2P3-201ENST00000441562 1189 ntBASIC3.92□□□□□ -1.78
HOXA9P31269 RAB28P3-201ENST00000448325 597 ntBASIC3.92□□□□□ -1.78
HOXA9P31269 AC006480.1-201ENST00000449887 378 ntBASIC3.92□□□□□ -1.78
HOXA9P31269 CALM1P2-201ENST00000452941 448 ntBASIC3.92□□□□□ -1.78
HOXA9P31269 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.92□□□□□ -1.78
HOXA9P31269 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.92□□□□□ -1.78
HOXA9P31269 AC084198.1-201ENST00000477747 402 ntBASIC3.92□□□□□ -1.78
HOXA9P31269 RPL31P61-201ENST00000496160 376 ntBASIC3.92□□□□□ -1.78
HOXA9P31269 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXA9P31269 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
HOXA9P31269 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXA9P31269 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms