Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CLIP1P30622 TNPO1P3-201ENST00000436471 2662 ntBASIC5.36□□□□□ -1.55
CLIP1P30622 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.35□□□□□ -1.55
CLIP1P30622 AC020633.1-201ENST00000468439 2247 ntBASIC5.35□□□□□ -1.55
CLIP1P30622 AC024341.1-201ENST00000526444 1552 ntBASIC5.35□□□□□ -1.55
CLIP1P30622 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLIP1P30622 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.35□□□□□ -1.55
CLIP1P30622 RSL24D1P3-201ENST00000449255 495 ntBASIC5.35□□□□□ -1.55
CLIP1P30622 HMGB1P21-201ENST00000502313 581 ntBASIC5.35□□□□□ -1.55
CLIP1P30622 AC098799.1-201ENST00000504752 800 ntBASIC5.35□□□□□ -1.55
CLIP1P30622 PCBP2P3-201ENST00000509726 843 ntBASIC5.35□□□□□ -1.55
CLIP1P30622 MIR4298-201ENST00000584380 73 ntBASIC5.35□□□□□ -1.55
CLIP1P30622 AC073657.2-201ENST00000605661 303 ntBASIC5.35□□□□□ -1.55
CLIP1P30622 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.35□□□□□ -1.55
CLIP1P30622 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLIP1P30622 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.35□□□□□ -1.55
CLIP1P30622 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CLIP1P30622 Z83843.1-201ENST00000604070 3685 ntBASIC5.35□□□□□ -1.55
CLIP1P30622 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CLIP1P30622 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CLIP1P30622 HMGB3P18-201ENST00000406327 590 ntBASIC5.34□□□□□ -1.55
CLIP1P30622 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.34□□□□□ -1.55
CLIP1P30622 RPL23AP82-202ENST00000427528 469 ntBASIC5.34□□□□□ -1.55
CLIP1P30622 AC006994.1-201ENST00000438212 839 ntBASIC5.34□□□□□ -1.55
CLIP1P30622 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.34□□□□□ -1.55
CLIP1P30622 CENPBD1P1-201ENST00000464061 469 ntBASIC5.34□□□□□ -1.55
CLIP1P30622 RN7SL504P-201ENST00000494496 287 ntBASIC5.34□□□□□ -1.55
CLIP1P30622 AC110794.1-201ENST00000505816 425 ntBASIC5.34□□□□□ -1.55
CLIP1P30622 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.34□□□□□ -1.55
CLIP1P30622 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.34□□□□□ -1.55
CLIP1P30622 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.34□□□□□ -1.55
CLIP1P30622 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC5.34□□□□□ -1.55
CLIP1P30622 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC5.34□□□□□ -1.55
CLIP1P30622 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC5.34□□□□□ -1.55
CLIP1P30622 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.34□□□□□ -1.55
CLIP1P30622 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CLIP1P30622 CR383658.2-201ENST00000547576 1525 ntBASIC5.33□□□□□ -1.56
CLIP1P30622 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLIP1P30622 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.33□□□□□ -1.56
CLIP1P30622 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLIP1P30622 AC021678.1-201ENST00000505195 936 ntBASIC5.33□□□□□ -1.56
CLIP1P30622 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.33□□□□□ -1.56
CLIP1P30622 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.33□□□□□ -1.56
CLIP1P30622 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.33□□□□□ -1.56
CLIP1P30622 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLIP1P30622 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLIP1P30622 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLIP1P30622 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLIP1P30622 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLIP1P30622 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.32□□□□□ -1.56
CLIP1P30622 AC127537.2-201ENST00000439258 465 ntBASIC5.32□□□□□ -1.56
CLIP1P30622 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.32□□□□□ -1.56
CLIP1P30622 AC097262.1-201ENST00000452559 548 ntBASIC5.32□□□□□ -1.56
CLIP1P30622 AC021205.2-201ENST00000480069 347 ntBASIC5.32□□□□□ -1.56
CLIP1P30622 AL049873.1-201ENST00000480540 376 ntBASIC5.32□□□□□ -1.56
CLIP1P30622 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.32□□□□□ -1.56
CLIP1P30622 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC5.32□□□□□ -1.56
CLIP1P30622 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.32□□□□□ -1.56
CLIP1P30622 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.32□□□□□ -1.56
CLIP1P30622 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.32□□□□□ -1.56
CLIP1P30622 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLIP1P30622 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.32□□□□□ -1.56
CLIP1P30622 AC000123.3-201ENST00000624029 4975 ntBASIC5.32□□□□□ -1.56
CLIP1P30622 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLIP1P30622 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.31□□□□□ -1.56
CLIP1P30622 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.31□□□□□ -1.56
CLIP1P30622 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.31□□□□□ -1.56
CLIP1P30622 AL671855.1-201ENST00000446875 1203 ntBASIC5.31□□□□□ -1.56
CLIP1P30622 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC5.31□□□□□ -1.56
CLIP1P30622 RPL37P3-201ENST00000456825 293 ntBASIC5.31□□□□□ -1.56
CLIP1P30622 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC5.31□□□□□ -1.56
CLIP1P30622 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.31□□□□□ -1.56
CLIP1P30622 MIMT1-201ENST00000597105 1050 ntBASIC5.31□□□□□ -1.56
CLIP1P30622 AC135507.2-201ENST00000612443 309 ntBASIC5.31□□□□□ -1.56
CLIP1P30622 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.31□□□□□ -1.56
CLIP1P30622 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLIP1P30622 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC5.31□□□□□ -1.56
CLIP1P30622 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLIP1P30622 RPL23AP57-201ENST00000332361 466 ntBASIC5.31□□□□□ -1.56
CLIP1P30622 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLIP1P30622 AL034403.1-201ENST00000399414 885 ntBASIC5.31□□□□□ -1.56
CLIP1P30622 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.31□□□□□ -1.56
CLIP1P30622 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.31□□□□□ -1.56
CLIP1P30622 AC008264.1-201ENST00000447612 367 ntBASIC5.31□□□□□ -1.56
CLIP1P30622 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.31□□□□□ -1.56
CLIP1P30622 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.31□□□□□ -1.56
CLIP1P30622 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.31□□□□□ -1.56
CLIP1P30622 AP000859.1-201ENST00000525536 307 ntBASIC5.31□□□□□ -1.56
CLIP1P30622 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.31□□□□□ -1.56
CLIP1P30622 AC124312.4-201ENST00000605533 310 ntBASIC5.31□□□□□ -1.56
CLIP1P30622 AC243756.2-201ENST00000618406 463 ntBASIC5.31□□□□□ -1.56
CLIP1P30622 SNORD39.4-201ENST00000620099 78 ntBASIC5.31□□□□□ -1.56
CLIP1P30622 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLIP1P30622 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.3□□□□□ -1.56
CLIP1P30622 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLIP1P30622 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLIP1P30622 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLIP1P30622 AC027287.1-201ENST00000553115 1453 ntBASIC5.3□□□□□ -1.56
CLIP1P30622 AC119744.1-201ENST00000454746 1715 ntBASIC5.3□□□□□ -1.56
CLIP1P30622 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms