Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DMAP28067 HMGB1P45-201ENST00000435986 653 ntBASIC3.28□□□□□ -1.88
HLA-DMAP28067 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DMAP28067 AC006994.1-201ENST00000438212 839 ntBASIC3.28□□□□□ -1.88
HLA-DMAP28067 MTCYBP31-201ENST00000438855 1122 ntBASIC3.28□□□□□ -1.88
HLA-DMAP28067 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DMAP28067 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.28□□□□□ -1.88
HLA-DMAP28067 RN7SL860P-201ENST00000473738 223 ntBASIC3.28□□□□□ -1.88
HLA-DMAP28067 RN7SL604P-201ENST00000492589 296 ntBASIC3.28□□□□□ -1.88
HLA-DMAP28067 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.28□□□□□ -1.88
HLA-DMAP28067 AL035404.1-201ENST00000497982 568 ntBASIC3.28□□□□□ -1.88
HLA-DMAP28067 RN7SKP92-201ENST00000517266 244 ntBASIC3.28□□□□□ -1.88
HLA-DMAP28067 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DMAP28067 LECT2-205ENST00000522943 574 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DMAP28067 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DMAP28067 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.28□□□□□ -1.88
HLA-DMAP28067 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.28□□□□□ -1.88
HLA-DMAP28067 UBE2NP1-201ENST00000545592 458 ntBASIC3.28□□□□□ -1.88
HLA-DMAP28067 AL049870.4-201ENST00000555741 486 ntBASIC3.28□□□□□ -1.88
HLA-DMAP28067 AC044860.2-201ENST00000561005 179 ntBASIC3.28□□□□□ -1.88
HLA-DMAP28067 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DMAP28067 RN7SL753P-201ENST00000581238 290 ntBASIC3.28□□□□□ -1.88
HLA-DMAP28067 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DMAP28067 AP000894.4-201ENST00000610185 483 ntBASIC3.28□□□□□ -1.88
HLA-DMAP28067 AC099778.2-201ENST00000610904 211 ntBASIC3.28□□□□□ -1.88
HLA-DMAP28067 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
HLA-DMAP28067 AC018445.2-201ENST00000622987 260 ntBASIC3.28□□□□□ -1.88
HLA-DMAP28067 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DMAP28067 MTCO1P8-201ENST00000416914 1523 ntBASIC3.28□□□□□ -1.88
HLA-DMAP28067 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DMAP28067 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
HLA-DMAP28067 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.28□□□□□ -1.89
HLA-DMAP28067 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.89
HLA-DMAP28067 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DMAP28067 AC005183.1-201ENST00000603687 1979 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
HLA-DMAP28067 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DMAP28067 MIR30E-201ENST00000362104 92 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 RNA5SP295-201ENST00000362655 121 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 SNORA7.2-201ENST00000364446 145 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 EIF5P1-201ENST00000400019 1231 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 RNA5SP31-201ENST00000411144 127 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 AC011933.1-201ENST00000413334 321 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DMAP28067 MTND2P16-201ENST00000419987 799 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 AC241520.1-201ENST00000422654 1099 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.27□□□□□ -1.89
HLA-DMAP28067 USP9YP9-201ENST00000429406 715 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.27□□□□□ -1.89
HLA-DMAP28067 RPL23AP22-201ENST00000437556 453 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DMAP28067 RPL23AP33-201ENST00000442301 452 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 AL627224.1-201ENST00000448334 444 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DMAP28067 AC116533.1-201ENST00000459748 321 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 AC096992.1-201ENST00000459808 709 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 TSACC-207ENST00000470342 601 ntTSL 2 BASIC3.27□□□□□ -1.89
HLA-DMAP28067 RN7SL177P-201ENST00000476596 299 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 AC084198.1-201ENST00000477747 402 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.27□□□□□ -1.89
HLA-DMAP28067 AC020893.1-201ENST00000502452 580 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 AC111000.3-201ENST00000508057 576 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DMAP28067 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DMAP28067 IGKV2-36-201ENST00000519999 223 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DMAP28067 OR4A12P-201ENST00000530847 918 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DMAP28067 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.27□□□□□ -1.89
HLA-DMAP28067 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.27□□□□□ -1.89
HLA-DMAP28067 AC092868.3-201ENST00000560515 784 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.27□□□□□ -1.89
HLA-DMAP28067 KPNA2P3-201ENST00000584190 848 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 AC008507.1-201ENST00000587506 734 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DMAP28067 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.27□□□□□ -1.89
HLA-DMAP28067 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DMAP28067 AC020915.5-201ENST00000596836 964 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 AC234771.5-201ENST00000600161 514 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 AC009948.4-201ENST00000604692 675 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 AL137849.1-201ENST00000604767 169 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 AC107294.3-201ENST00000609211 526 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 MIR6868-201ENST00000611215 58 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 AC005156.1-201ENST00000613371 573 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 AC100827.5-201ENST00000615883 426 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DMAP28067 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DMAP28067 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DMAP28067 AL132640.2-201ENST00000559968 1698 ntBASIC3.27□□□□□ -1.89
HLA-DMAP28067 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.26□□□□□ -1.89
HLA-DMAP28067 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DMAP28067 AC116096.1-201ENST00000566804 2314 ntBASIC3.26□□□□□ -1.89
HLA-DMAP28067 MTCO1P24-201ENST00000515438 1558 ntBASIC3.26□□□□□ -1.89
HLA-DMAP28067 AC092326.2-201ENST00000624772 1561 ntBASIC3.26□□□□□ -1.89
HLA-DMAP28067 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DMAP28067 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
HLA-DMAP28067 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DMAP28067 RNA5SP391-201ENST00000363456 119 ntBASIC3.26□□□□□ -1.89
HLA-DMAP28067 AL161909.1-201ENST00000397390 712 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms