Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPN3P26045 PTGES3P1-201ENST00000439531 483 ntBASIC4.29□□□□□ -1.72
PTPN3P26045 AC004854.1-201ENST00000440356 349 ntBASIC4.29□□□□□ -1.72
PTPN3P26045 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPN3P26045 RPL23AP15-201ENST00000450202 459 ntBASIC4.29□□□□□ -1.72
PTPN3P26045 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PTPN3P26045 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN3P26045 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPN3P26045 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPN3P26045 RNU7-140P-201ENST00000459546 60 ntBASIC4.29□□□□□ -1.72
PTPN3P26045 AC116533.1-201ENST00000459748 321 ntBASIC4.29□□□□□ -1.72
PTPN3P26045 AC041039.1-201ENST00000485656 536 ntBASIC4.29□□□□□ -1.72
PTPN3P26045 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPN3P26045 AC093840.1-201ENST00000511599 336 ntBASIC4.29□□□□□ -1.72
PTPN3P26045 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPN3P26045 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.29□□□□□ -1.72
PTPN3P26045 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.29□□□□□ -1.72
PTPN3P26045 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPN3P26045 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPN3P26045 AC069240.1-201ENST00000548774 375 ntBASIC4.29□□□□□ -1.72
PTPN3P26045 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.29□□□□□ -1.72
PTPN3P26045 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPN3P26045 AC063950.1-201ENST00000552036 308 ntBASIC4.29□□□□□ -1.72
PTPN3P26045 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPN3P26045 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPN3P26045 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPN3P26045 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.29□□□□□ -1.72
PTPN3P26045 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPN3P26045 AC026790.2-201ENST00000606282 430 ntBASIC4.29□□□□□ -1.72
PTPN3P26045 AL121652.1-201ENST00000608851 448 ntBASIC4.29□□□□□ -1.72
PTPN3P26045 AL136295.6-201ENST00000610486 658 ntBASIC4.29□□□□□ -1.72
PTPN3P26045 RNU6-156P-201ENST00000621869 107 ntBASIC4.29□□□□□ -1.72
PTPN3P26045 AC008785.1-201ENST00000624475 456 ntBASIC4.29□□□□□ -1.72
PTPN3P26045 FAM157B-203ENST00000639350 358 ntBASIC4.29□□□□□ -1.72
PTPN3P26045 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN3P26045 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPN3P26045 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPN3P26045 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PTPN3P26045 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN3P26045 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPN3P26045 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.28□□□□□ -1.72
PTPN3P26045 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN3P26045 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN3P26045 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PTPN3P26045 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN3P26045 TAF13P2-201ENST00000416876 286 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 RPS12P23-201ENST00000419579 400 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 AL592293.2-201ENST00000422292 996 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPN3P26045 AC092634.2-201ENST00000428146 1010 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.28□□□□□ -1.72
PTPN3P26045 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPN3P26045 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPN3P26045 RPL7AP28-201ENST00000464513 571 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 RN7SL585P-201ENST00000470538 280 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN3P26045 AC091959.2-201ENST00000477363 321 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.28□□□□□ -1.72
PTPN3P26045 UBE2V1P12-201ENST00000503954 474 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 AC096571.1-202ENST00000506634 735 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPN3P26045 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPN3P26045 HPRT1P1-201ENST00000509498 657 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 PARP4P3-201ENST00000510265 317 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 KCTD9P2-201ENST00000512203 1013 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 RNU6-415P-201ENST00000516252 97 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 RAB9BP1-201ENST00000519581 626 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPN3P26045 AC021451.1-201ENST00000523498 1129 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 AC104417.1-201ENST00000523974 751 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN3P26045 AC009643.1-201ENST00000532030 391 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPN3P26045 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PTPN3P26045 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.28□□□□□ -1.72
PTPN3P26045 CENPUP2-201ENST00000555897 1186 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 PSMB7P1-201ENST00000556349 514 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.28□□□□□ -1.72
PTPN3P26045 MTCO1P40-201ENST00000574371 625 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 MIR4277-201ENST00000578298 84 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 MIR4284-201ENST00000578924 81 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 AC017100.2-201ENST00000584628 355 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 AL161729.3-201ENST00000603533 673 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 LLPHP1-201ENST00000603571 367 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 AC024060.1-201ENST00000607052 494 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 MIR7702-201ENST00000621931 59 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 AC104985.3-201ENST00000623479 597 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 AC011944.2-201ENST00000624440 683 ntBASIC4.28□□□□□ -1.72
PTPN3P26045 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN3P26045 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
PTPN3P26045 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.27□□□□□ -1.73
PTPN3P26045 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
PTPN3P26045 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PTPN3P26045 RNA5SP388-201ENST00000362584 119 ntBASIC4.27□□□□□ -1.73
PTPN3P26045 RNU1-32P-201ENST00000363937 159 ntBASIC4.27□□□□□ -1.73
PTPN3P26045 U3.15-201ENST00000365398 212 ntBASIC4.27□□□□□ -1.73
PTPN3P26045 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.27□□□□□ -1.73
PTPN3P26045 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN3P26045 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms