Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.17□□□□□ -1.42
NFKB1P19838 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.17□□□□□ -1.42
NFKB1P19838 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.17□□□□□ -1.42
NFKB1P19838 MIR3149-201ENST00000584629 83 ntBASIC6.17□□□□□ -1.42
NFKB1P19838 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.17□□□□□ -1.42
NFKB1P19838 RNU6-89P-201ENST00000606519 100 ntBASIC6.17□□□□□ -1.42
NFKB1P19838 AL391813.2-201ENST00000609113 322 ntBASIC6.17□□□□□ -1.42
NFKB1P19838 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.17□□□□□ -1.42
NFKB1P19838 uc_338.26-201ENST00000612659 160 ntBASIC6.17□□□□□ -1.42
NFKB1P19838 uc_338.31-201ENST00000615595 186 ntBASIC6.17□□□□□ -1.42
NFKB1P19838 AL512652.1-201ENST00000619006 500 ntBASIC6.17□□□□□ -1.42
NFKB1P19838 AC079597.1-201ENST00000624306 508 ntBASIC6.17□□□□□ -1.42
NFKB1P19838 AC119674.1-207ENST00000641355 633 ntBASIC6.17□□□□□ -1.42
NFKB1P19838 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
NFKB1P19838 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
NFKB1P19838 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.17□□□□□ -1.42
NFKB1P19838 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NFKB1P19838 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NFKB1P19838 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.17□□□□□ -1.42
NFKB1P19838 AF287957.1-201ENST00000607368 1595 ntBASIC6.17□□□□□ -1.42
NFKB1P19838 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.17□□□□□ -1.42
NFKB1P19838 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
NFKB1P19838 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
NFKB1P19838 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.17□□□□□ -1.42
NFKB1P19838 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NFKB1P19838 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NFKB1P19838 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
NFKB1P19838 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
NFKB1P19838 AC092125.1-201ENST00000562568 1995 ntBASIC6.17□□□□□ -1.42
NFKB1P19838 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.17□□□□□ -1.42
NFKB1P19838 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NFKB1P19838 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NFKB1P19838 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NFKB1P19838 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NFKB1P19838 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NFKB1P19838 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC6.16□□□□□ -1.42
NFKB1P19838 KPNA2P2-201ENST00000419546 1489 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.16□□□□□ -1.42
NFKB1P19838 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NFKB1P19838 OR10R3P-201ENST00000361688 942 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 RNU6-853P-201ENST00000364306 107 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 RNU1-59P-201ENST00000364829 162 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.16□□□□□ -1.42
NFKB1P19838 RNU6-444P-201ENST00000383988 108 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 Y_RNA.452-201ENST00000384202 108 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 RNU6-606P-201ENST00000384721 111 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NFKB1P19838 RPL23AP17-201ENST00000401064 499 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 AL592114.1-201ENST00000403842 483 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.16□□□□□ -1.42
NFKB1P19838 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC6.16□□□□□ -1.42
NFKB1P19838 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.16□□□□□ -1.42
NFKB1P19838 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
NFKB1P19838 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.16□□□□□ -1.42
NFKB1P19838 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC6.16□□□□□ -1.42
NFKB1P19838 RPL36AP15-201ENST00000444514 266 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 AL035551.1-201ENST00000446931 348 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 AC073415.1-201ENST00000449240 153 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 AL162739.1-201ENST00000450606 307 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 MTND3P16-201ENST00000452205 344 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 HMGN3P1-201ENST00000453847 193 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC6.16□□□□□ -1.42
NFKB1P19838 Y_RNA.635-201ENST00000459041 101 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 VN1R17P-201ENST00000472048 1090 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 AC010301.1-201ENST00000473936 355 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 AC012181.1-201ENST00000479895 423 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 RNU6-488P-201ENST00000515918 99 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC6.16□□□□□ -1.42
NFKB1P19838 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC6.16□□□□□ -1.42
NFKB1P19838 AC022634.1-201ENST00000520765 532 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.16□□□□□ -1.42
NFKB1P19838 COX6CP5-201ENST00000527162 228 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC6.16□□□□□ -1.42
NFKB1P19838 OR5BN1P-201ENST00000532955 829 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.16□□□□□ -1.42
NFKB1P19838 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC6.16□□□□□ -1.42
NFKB1P19838 NPM1P42-201ENST00000560329 862 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 OR1E3-201ENST00000575608 948 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.16□□□□□ -1.42
NFKB1P19838 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.16□□□□□ -1.42
NFKB1P19838 AC098848.2-201ENST00000588023 330 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.16□□□□□ -1.42
NFKB1P19838 AC119403.2-201ENST00000590960 598 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 U1.25-201ENST00000614085 162 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 MIR6721-201ENST00000617181 87 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 U1.31-201ENST00000620022 160 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 AC069234.4-201ENST00000621276 412 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 AC111152.1-202ENST00000635848 339 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.16□□□□□ -1.42
NFKB1P19838 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NFKB1P19838 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
NFKB1P19838 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
NFKB1P19838 ASNSP3-201ENST00000451989 1306 ntBASIC6.16□□□□□ -1.42
NFKB1P19838 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NFKB1P19838 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NFKB1P19838 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
NFKB1P19838 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NFKB1P19838 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.16□□□□□ -1.42
NFKB1P19838 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NFKB1P19838 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms