Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 RPS6P2-201ENST00000454208 705 ntBASIC3.48□□□□□ -1.85
HMGA1P17096 AC110794.1-201ENST00000505816 425 ntBASIC3.48□□□□□ -1.85
HMGA1P17096 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.48□□□□□ -1.85
HMGA1P17096 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.48□□□□□ -1.85
HMGA1P17096 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.48□□□□□ -1.85
HMGA1P17096 AP000859.1-201ENST00000525536 307 ntBASIC3.48□□□□□ -1.85
HMGA1P17096 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.48□□□□□ -1.85
HMGA1P17096 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.48□□□□□ -1.85
HMGA1P17096 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.48□□□□□ -1.85
HMGA1P17096 GTF2IP8-201ENST00000560687 584 ntBASIC3.48□□□□□ -1.85
HMGA1P17096 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.48□□□□□ -1.85
HMGA1P17096 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.48□□□□□ -1.85
HMGA1P17096 AC125494.3-201ENST00000602759 455 ntBASIC3.48□□□□□ -1.85
HMGA1P17096 AL160281.1-201ENST00000605307 311 ntBASIC3.48□□□□□ -1.85
HMGA1P17096 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HMGA1P17096 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.48□□□□□ -1.85
HMGA1P17096 AL356321.1-201ENST00000621360 228 ntBASIC3.48□□□□□ -1.85
HMGA1P17096 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.48□□□□□ -1.85
HMGA1P17096 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
HMGA1P17096 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
HMGA1P17096 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HMGA1P17096 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HMGA1P17096 AC024341.1-201ENST00000526444 1552 ntBASIC3.47□□□□□ -1.85
HMGA1P17096 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
HMGA1P17096 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.47□□□□□ -1.85
HMGA1P17096 Z92545.1-201ENST00000411782 234 ntBASIC3.47□□□□□ -1.85
HMGA1P17096 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.47□□□□□ -1.85
HMGA1P17096 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.47□□□□□ -1.85
HMGA1P17096 RPS29P2-201ENST00000479278 136 ntBASIC3.47□□□□□ -1.85
HMGA1P17096 SETP6-201ENST00000479329 568 ntBASIC3.47□□□□□ -1.85
HMGA1P17096 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.47□□□□□ -1.85
HMGA1P17096 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.47□□□□□ -1.85
HMGA1P17096 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.47□□□□□ -1.85
HMGA1P17096 APOOP4-201ENST00000513530 597 ntBASIC3.47□□□□□ -1.85
HMGA1P17096 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.47□□□□□ -1.85
HMGA1P17096 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.47□□□□□ -1.85
HMGA1P17096 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.47□□□□□ -1.85
HMGA1P17096 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.47□□□□□ -1.85
HMGA1P17096 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.47□□□□□ -1.85
HMGA1P17096 AC093014.1-201ENST00000548926 724 ntBASIC3.47□□□□□ -1.85
HMGA1P17096 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.47□□□□□ -1.85
HMGA1P17096 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.47□□□□□ -1.85
HMGA1P17096 AC106785.3-201ENST00000564064 847 ntBASIC3.47□□□□□ -1.85
HMGA1P17096 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.47□□□□□ -1.85
HMGA1P17096 AC141257.3-201ENST00000572906 215 ntBASIC3.47□□□□□ -1.85
HMGA1P17096 AC011471.1-201ENST00000585766 187 ntBASIC3.47□□□□□ -1.85
HMGA1P17096 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.47□□□□□ -1.85
HMGA1P17096 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.47□□□□□ -1.85
HMGA1P17096 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.47□□□□□ -1.85
HMGA1P17096 AC073657.2-201ENST00000605661 303 ntBASIC3.47□□□□□ -1.85
HMGA1P17096 AC006946.3-201ENST00000609791 756 ntBASIC3.47□□□□□ -1.85
HMGA1P17096 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
HMGA1P17096 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.47□□□□□ -1.85
HMGA1P17096 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.47□□□□□ -1.85
HMGA1P17096 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.85
HMGA1P17096 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HMGA1P17096 RNU1-70P-201ENST00000362618 164 ntBASIC3.46□□□□□ -1.86
HMGA1P17096 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HMGA1P17096 MIR128-1-201ENST00000384921 82 ntBASIC3.46□□□□□ -1.86
HMGA1P17096 AL034403.1-201ENST00000399414 885 ntBASIC3.46□□□□□ -1.86
HMGA1P17096 AC006028.1-201ENST00000438379 402 ntBASIC3.46□□□□□ -1.86
HMGA1P17096 AC008264.1-201ENST00000447612 367 ntBASIC3.46□□□□□ -1.86
HMGA1P17096 MTCO3P16-201ENST00000454456 754 ntBASIC3.46□□□□□ -1.86
HMGA1P17096 AC104849.1-201ENST00000462623 405 ntBASIC3.46□□□□□ -1.86
HMGA1P17096 MTND6P6-201ENST00000478031 263 ntBASIC3.46□□□□□ -1.86
HMGA1P17096 ACTG1P13-201ENST00000486987 1043 ntBASIC3.46□□□□□ -1.86
HMGA1P17096 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.46□□□□□ -1.86
HMGA1P17096 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.46□□□□□ -1.86
HMGA1P17096 AC023141.12-201ENST00000512399 199 ntBASIC3.46□□□□□ -1.86
HMGA1P17096 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.46□□□□□ -1.86
HMGA1P17096 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.46□□□□□ -1.86
HMGA1P17096 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC3.46□□□□□ -1.86
HMGA1P17096 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HMGA1P17096 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.46□□□□□ -1.86
HMGA1P17096 AC027287.1-201ENST00000553115 1453 ntBASIC3.46□□□□□ -1.86
HMGA1P17096 AC116158.1-201ENST00000560231 2129 ntBASIC3.46□□□□□ -1.86
HMGA1P17096 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HMGA1P17096 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.45□□□□□ -1.86
HMGA1P17096 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.45□□□□□ -1.86
HMGA1P17096 AL136116.1-201ENST00000403591 381 ntBASIC3.45□□□□□ -1.86
HMGA1P17096 AL136131.1-201ENST00000406079 803 ntBASIC3.45□□□□□ -1.86
HMGA1P17096 RNU4-47P-201ENST00000410876 114 ntBASIC3.45□□□□□ -1.86
HMGA1P17096 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.45□□□□□ -1.86
HMGA1P17096 AC002075.2-201ENST00000425207 252 ntBASIC3.45□□□□□ -1.86
HMGA1P17096 AC127537.2-201ENST00000439258 465 ntBASIC3.45□□□□□ -1.86
HMGA1P17096 AL589765.3-201ENST00000446084 462 ntBASIC3.45□□□□□ -1.86
HMGA1P17096 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.45□□□□□ -1.86
HMGA1P17096 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.45□□□□□ -1.86
HMGA1P17096 AC099560.2-201ENST00000457554 255 ntBASIC3.45□□□□□ -1.86
HMGA1P17096 SUMO2P4-201ENST00000504193 276 ntBASIC3.45□□□□□ -1.86
HMGA1P17096 RNU6ATAC39P-201ENST00000516309 149 ntBASIC3.45□□□□□ -1.86
HMGA1P17096 RN7SKP116-201ENST00000516902 319 ntBASIC3.45□□□□□ -1.86
HMGA1P17096 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.45□□□□□ -1.86
HMGA1P17096 AC090281.1-201ENST00000523019 276 ntBASIC3.45□□□□□ -1.86
HMGA1P17096 OR4A2P-201ENST00000527276 913 ntBASIC3.45□□□□□ -1.86
HMGA1P17096 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HMGA1P17096 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.45□□□□□ -1.86
HMGA1P17096 HIGD1AP1-201ENST00000550979 275 ntBASIC3.45□□□□□ -1.86
HMGA1P17096 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.45□□□□□ -1.86
HMGA1P17096 AC026422.1-201ENST00000623961 452 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms