Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NID1P14543 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.89□□□□□ -1.47
NID1P14543 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
NID1P14543 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NID1P14543 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
NID1P14543 SNORD16-201ENST00000362803 99 ntBASIC5.89□□□□□ -1.47
NID1P14543 Y_RNA.153-201ENST00000363615 91 ntBASIC5.89□□□□□ -1.47
NID1P14543 Y_RNA.482-201ENST00000384377 111 ntBASIC5.89□□□□□ -1.47
NID1P14543 SOD2P1-201ENST00000396543 562 ntBASIC5.89□□□□□ -1.47
NID1P14543 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
NID1P14543 SSXP10-201ENST00000402595 565 ntBASIC5.89□□□□□ -1.47
NID1P14543 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.89□□□□□ -1.47
NID1P14543 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.89□□□□□ -1.47
NID1P14543 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.89□□□□□ -1.47
NID1P14543 RPS20P5-201ENST00000434808 360 ntBASIC5.89□□□□□ -1.47
NID1P14543 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.89□□□□□ -1.47
NID1P14543 EIF5AP4-201ENST00000441206 465 ntBASIC5.89□□□□□ -1.47
NID1P14543 TIMM8BP2-201ENST00000445940 251 ntBASIC5.89□□□□□ -1.47
NID1P14543 AL161722.1-201ENST00000446972 1032 ntBASIC5.89□□□□□ -1.47
NID1P14543 AC016724.1-201ENST00000453215 421 ntBASIC5.89□□□□□ -1.47
NID1P14543 AC026410.2-201ENST00000460281 156 ntBASIC5.89□□□□□ -1.47
NID1P14543 RPL23AP11-201ENST00000475260 469 ntBASIC5.89□□□□□ -1.47
NID1P14543 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.89□□□□□ -1.47
NID1P14543 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
NID1P14543 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.89□□□□□ -1.47
NID1P14543 SNORD27.1-201ENST00000516319 72 ntBASIC5.89□□□□□ -1.47
NID1P14543 RN7SKP70-201ENST00000516655 271 ntBASIC5.89□□□□□ -1.47
NID1P14543 MYL12AP1-201ENST00000518490 515 ntBASIC5.89□□□□□ -1.47
NID1P14543 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.89□□□□□ -1.47
NID1P14543 COX6B1P6-201ENST00000522347 255 ntBASIC5.89□□□□□ -1.47
NID1P14543 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.89□□□□□ -1.47
NID1P14543 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.89□□□□□ -1.47
NID1P14543 AC009120.3-201ENST00000563335 499 ntBASIC5.89□□□□□ -1.47
NID1P14543 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.89□□□□□ -1.47
NID1P14543 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.89□□□□□ -1.47
NID1P14543 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.89□□□□□ -1.47
NID1P14543 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.89□□□□□ -1.47
NID1P14543 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.89□□□□□ -1.47
NID1P14543 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.89□□□□□ -1.47
NID1P14543 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.89□□□□□ -1.47
NID1P14543 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.89□□□□□ -1.47
NID1P14543 AC068213.1-201ENST00000625124 226 ntBASIC5.89□□□□□ -1.47
NID1P14543 LINC02495-203ENST00000636704 242 ntBASIC5.89□□□□□ -1.47
NID1P14543 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NID1P14543 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
NID1P14543 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NID1P14543 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
NID1P14543 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.89□□□□□ -1.47
NID1P14543 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.89□□□□□ -1.47
NID1P14543 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NID1P14543 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC5.89□□□□□ -1.47
NID1P14543 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NID1P14543 BIN2P1-201ENST00000504996 1530 ntBASIC5.89□□□□□ -1.47
NID1P14543 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.89□□□□□ -1.47
NID1P14543 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.89□□□□□ -1.47
NID1P14543 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NID1P14543 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.88□□□□□ -1.47
NID1P14543 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.88□□□□□ -1.47
NID1P14543 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
NID1P14543 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.88□□□□□ -1.47
NID1P14543 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.88□□□□□ -1.47
NID1P14543 AC130304.1-201ENST00000622942 2385 ntBASIC5.88□□□□□ -1.47
NID1P14543 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.88□□□□□ -1.47
NID1P14543 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
NID1P14543 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
NID1P14543 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NID1P14543 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
NID1P14543 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NID1P14543 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NID1P14543 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.88□□□□□ -1.47
NID1P14543 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NID1P14543 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NID1P14543 Y_RNA.80-201ENST00000362996 102 ntBASIC5.88□□□□□ -1.47
NID1P14543 RNU1-84P-201ENST00000365447 164 ntBASIC5.88□□□□□ -1.47
NID1P14543 Y_RNA.367-201ENST00000365544 101 ntBASIC5.88□□□□□ -1.47
NID1P14543 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
NID1P14543 RNU6-310P-201ENST00000384655 107 ntBASIC5.88□□□□□ -1.47
NID1P14543 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
NID1P14543 AL139397.2-201ENST00000404529 772 ntBASIC5.88□□□□□ -1.47
NID1P14543 RN7SKP281-201ENST00000410472 352 ntBASIC5.88□□□□□ -1.47
NID1P14543 AC116036.1-201ENST00000412199 367 ntBASIC5.88□□□□□ -1.47
NID1P14543 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.88□□□□□ -1.47
NID1P14543 AL389925.1-201ENST00000432257 728 ntBASIC5.88□□□□□ -1.47
NID1P14543 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NID1P14543 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.88□□□□□ -1.47
NID1P14543 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.88□□□□□ -1.47
NID1P14543 RPL21P23-201ENST00000446654 460 ntBASIC5.88□□□□□ -1.47
NID1P14543 AP1S2P1-201ENST00000457344 379 ntBASIC5.88□□□□□ -1.47
NID1P14543 AC018638.3-201ENST00000461273 132 ntBASIC5.88□□□□□ -1.47
NID1P14543 RPL23AP71-201ENST00000470966 469 ntBASIC5.88□□□□□ -1.47
NID1P14543 AL161747.1-201ENST00000480068 358 ntBASIC5.88□□□□□ -1.47
NID1P14543 AC068781.1-201ENST00000488231 618 ntBASIC5.88□□□□□ -1.47
NID1P14543 AC011005.3-201ENST00000491624 395 ntBASIC5.88□□□□□ -1.47
NID1P14543 AL049874.2-201ENST00000492636 288 ntBASIC5.88□□□□□ -1.47
NID1P14543 RPS27P27-201ENST00000498779 255 ntBASIC5.88□□□□□ -1.47
NID1P14543 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC5.88□□□□□ -1.47
NID1P14543 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.88□□□□□ -1.47
NID1P14543 RN7SKP219-201ENST00000516825 296 ntBASIC5.88□□□□□ -1.47
NID1P14543 AC011853.1-201ENST00000518911 454 ntBASIC5.88□□□□□ -1.47
NID1P14543 AL133399.1-201ENST00000527476 298 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 163.8 ms