Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 KCTD9P6-201ENST00000522306 950 ntBASIC5.77□□□□□ -1.49
TOP2AP11388 PSMA2P1-201ENST00000526365 646 ntBASIC5.77□□□□□ -1.49
TOP2AP11388 AC006504.3-201ENST00000586818 523 ntBASIC5.77□□□□□ -1.49
TOP2AP11388 AC006023.1-201ENST00000603944 259 ntBASIC5.77□□□□□ -1.49
TOP2AP11388 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TOP2AP11388 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TOP2AP11388 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TOP2AP11388 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TOP2AP11388 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC5.76□□□□□ -1.49
TOP2AP11388 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
TOP2AP11388 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.76□□□□□ -1.49
TOP2AP11388 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.76□□□□□ -1.49
TOP2AP11388 RPS29P26-201ENST00000477483 171 ntBASIC5.76□□□□□ -1.49
TOP2AP11388 RPL23AP73-201ENST00000492507 471 ntBASIC5.76□□□□□ -1.49
TOP2AP11388 AC069306.1-201ENST00000507006 843 ntBASIC5.76□□□□□ -1.49
TOP2AP11388 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.76□□□□□ -1.49
TOP2AP11388 AC018555.1-201ENST00000567548 1980 ntBASIC5.76□□□□□ -1.49
TOP2AP11388 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TOP2AP11388 AC006504.1-201ENST00000562493 3666 ntBASIC5.76□□□□□ -1.49
TOP2AP11388 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TOP2AP11388 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TOP2AP11388 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC5.75□□□□□ -1.49
TOP2AP11388 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TOP2AP11388 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TOP2AP11388 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.75□□□□□ -1.49
TOP2AP11388 AL357552.1-201ENST00000445254 415 ntBASIC5.75□□□□□ -1.49
TOP2AP11388 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.75□□□□□ -1.49
TOP2AP11388 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.75□□□□□ -1.49
TOP2AP11388 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.75□□□□□ -1.49
TOP2AP11388 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC5.75□□□□□ -1.49
TOP2AP11388 AC007390.2-201ENST00000606229 3803 ntBASIC5.75□□□□□ -1.49
TOP2AP11388 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.75□□□□□ -1.49
TOP2AP11388 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC5.75□□□□□ -1.49
TOP2AP11388 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TOP2AP11388 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC5.75□□□□□ -1.49
TOP2AP11388 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
TOP2AP11388 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.75□□□□□ -1.49
TOP2AP11388 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
TOP2AP11388 RNA5SP235-201ENST00000365411 114 ntBASIC5.74□□□□□ -1.49
TOP2AP11388 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.74□□□□□ -1.49
TOP2AP11388 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.74□□□□□ -1.49
TOP2AP11388 AC012065.2-201ENST00000421295 375 ntBASIC5.74□□□□□ -1.49
TOP2AP11388 COTL1P1-201ENST00000422309 375 ntBASIC5.74□□□□□ -1.49
TOP2AP11388 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.74□□□□□ -1.49
TOP2AP11388 AC008065.1-201ENST00000428525 348 ntBASIC5.74□□□□□ -1.49
TOP2AP11388 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.74□□□□□ -1.49
TOP2AP11388 RN7SL93P-201ENST00000463035 293 ntBASIC5.74□□□□□ -1.49
TOP2AP11388 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.74□□□□□ -1.49
TOP2AP11388 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TOP2AP11388 AC087888.1-201ENST00000550884 1254 ntBASIC5.74□□□□□ -1.49
TOP2AP11388 AC106785.3-201ENST00000564064 847 ntBASIC5.74□□□□□ -1.49
TOP2AP11388 AL360157.1-201ENST00000565962 87 ntBASIC5.74□□□□□ -1.49
TOP2AP11388 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.74□□□□□ -1.49
TOP2AP11388 AC006946.3-201ENST00000609791 756 ntBASIC5.74□□□□□ -1.49
TOP2AP11388 AC018692.3-201ENST00000623929 123 ntBASIC5.74□□□□□ -1.49
TOP2AP11388 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.74□□□□□ -1.49
TOP2AP11388 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
TOP2AP11388 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
TOP2AP11388 NCAPGP1-201ENST00000505112 1814 ntBASIC5.74□□□□□ -1.49
TOP2AP11388 AL138885.1-201ENST00000405921 675 ntBASIC5.74□□□□□ -1.49
TOP2AP11388 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TOP2AP11388 FCF1P3-201ENST00000496394 590 ntBASIC5.74□□□□□ -1.49
TOP2AP11388 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.74□□□□□ -1.49
TOP2AP11388 AC138409.2-202ENST00000507274 458 ntBASIC5.74□□□□□ -1.49
TOP2AP11388 NDUFB9P3-201ENST00000521269 501 ntBASIC5.74□□□□□ -1.49
TOP2AP11388 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC5.74□□□□□ -1.49
TOP2AP11388 HNRNPDLP4-201ENST00000605144 301 ntBASIC5.74□□□□□ -1.49
TOP2AP11388 AC079298.2-201ENST00000623885 459 ntBASIC5.74□□□□□ -1.49
TOP2AP11388 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC5.73□□□□□ -1.49
TOP2AP11388 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TOP2AP11388 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TOP2AP11388 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.73□□□□□ -1.49
TOP2AP11388 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TOP2AP11388 AC002075.2-201ENST00000425207 252 ntBASIC5.73□□□□□ -1.49
TOP2AP11388 YWHAEP5-201ENST00000431545 765 ntBASIC5.73□□□□□ -1.49
TOP2AP11388 AC008264.1-201ENST00000447612 367 ntBASIC5.73□□□□□ -1.49
TOP2AP11388 AC099560.2-201ENST00000457554 255 ntBASIC5.73□□□□□ -1.49
TOP2AP11388 AC010469.1-201ENST00000463864 576 ntBASIC5.73□□□□□ -1.49
TOP2AP11388 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.73□□□□□ -1.49
TOP2AP11388 AC010374.2-201ENST00000512933 535 ntBASIC5.73□□□□□ -1.49
TOP2AP11388 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.73□□□□□ -1.49
TOP2AP11388 AL121576.1-201ENST00000556055 276 ntBASIC5.73□□□□□ -1.49
TOP2AP11388 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC5.73□□□□□ -1.49
TOP2AP11388 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.73□□□□□ -1.49
TOP2AP11388 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC5.73□□□□□ -1.49
TOP2AP11388 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.73□□□□□ -1.49
TOP2AP11388 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.72□□□□□ -1.49
TOP2AP11388 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TOP2AP11388 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TOP2AP11388 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC5.72□□□□□ -1.49
TOP2AP11388 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.72□□□□□ -1.49
TOP2AP11388 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TOP2AP11388 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TOP2AP11388 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
TOP2AP11388 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
TOP2AP11388 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.72□□□□□ -1.49
TOP2AP11388 SKP1P1-201ENST00000438081 489 ntBASIC5.72□□□□□ -1.49
TOP2AP11388 HMGB1P5-202ENST00000451497 985 ntBASIC5.72□□□□□ -1.49
TOP2AP11388 AC012123.2-201ENST00000485809 248 ntBASIC5.72□□□□□ -1.49
TOP2AP11388 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms