Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 RNU5A-2P-201ENST00000384337 116 ntBASIC5.58□□□□□ -1.52
SNRPA1P09661 SNORA37-201ENST00000384504 129 ntBASIC5.58□□□□□ -1.52
SNRPA1P09661 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SNRPA1P09661 AC104297.1-201ENST00000393779 870 ntBASIC5.58□□□□□ -1.52
SNRPA1P09661 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.58□□□□□ -1.52
SNRPA1P09661 RPL23AP25-201ENST00000430973 463 ntBASIC5.58□□□□□ -1.52
SNRPA1P09661 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.58□□□□□ -1.52
SNRPA1P09661 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC5.58□□□□□ -1.52
SNRPA1P09661 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.58□□□□□ -1.52
SNRPA1P09661 VN1R32P-201ENST00000452234 905 ntBASIC5.58□□□□□ -1.52
SNRPA1P09661 DDX39BP2-208ENST00000453923 258 ntBASIC5.58□□□□□ -1.52
SNRPA1P09661 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNRPA1P09661 RPL35AP15-201ENST00000468042 339 ntBASIC5.58□□□□□ -1.52
SNRPA1P09661 BZW1P2-201ENST00000473537 826 ntBASIC5.58□□□□□ -1.52
SNRPA1P09661 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.58□□□□□ -1.52
SNRPA1P09661 RPS27AP13-201ENST00000498403 237 ntBASIC5.58□□□□□ -1.52
SNRPA1P09661 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.58□□□□□ -1.52
SNRPA1P09661 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.58□□□□□ -1.52
SNRPA1P09661 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC5.58□□□□□ -1.52
SNRPA1P09661 MTND5P13-201ENST00000513046 1079 ntBASIC5.58□□□□□ -1.52
SNRPA1P09661 AC109635.6-201ENST00000525487 1113 ntBASIC5.58□□□□□ -1.52
SNRPA1P09661 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNRPA1P09661 AC025260.1-201ENST00000548858 430 ntBASIC5.58□□□□□ -1.52
SNRPA1P09661 DUXAP1-201ENST00000556632 463 ntBASIC5.58□□□□□ -1.52
SNRPA1P09661 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.58□□□□□ -1.52
SNRPA1P09661 RN7SL600P-201ENST00000581811 299 ntBASIC5.58□□□□□ -1.52
SNRPA1P09661 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.58□□□□□ -1.52
SNRPA1P09661 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.58□□□□□ -1.52
SNRPA1P09661 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.58□□□□□ -1.52
SNRPA1P09661 AC106791.2-201ENST00000604680 391 ntBASIC5.58□□□□□ -1.52
SNRPA1P09661 IMMP1LP1-201ENST00000605170 488 ntBASIC5.58□□□□□ -1.52
SNRPA1P09661 AC090948.2-201ENST00000607363 564 ntBASIC5.58□□□□□ -1.52
SNRPA1P09661 AC072039.2-201ENST00000608883 439 ntBASIC5.58□□□□□ -1.52
SNRPA1P09661 FAM27D1-201ENST00000612308 341 ntBASIC5.58□□□□□ -1.52
SNRPA1P09661 AL445363.3-201ENST00000623080 671 ntBASIC5.58□□□□□ -1.52
SNRPA1P09661 AC091965.5-201ENST00000624785 342 ntBASIC5.58□□□□□ -1.52
SNRPA1P09661 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.58□□□□□ -1.52
SNRPA1P09661 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.58□□□□□ -1.52
SNRPA1P09661 AC005005.4-201ENST00000623789 16698 ntBASIC5.58□□□□□ -1.52
SNRPA1P09661 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNRPA1P09661 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNRPA1P09661 VPS35P1-201ENST00000563400 1518 ntBASIC5.58□□□□□ -1.52
SNRPA1P09661 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNRPA1P09661 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SNRPA1P09661 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SNRPA1P09661 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SNRPA1P09661 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
SNRPA1P09661 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNRPA1P09661 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNRPA1P09661 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.57□□□□□ -1.52
SNRPA1P09661 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SNRPA1P09661 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SNRPA1P09661 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNRPA1P09661 SEC63P2-201ENST00000503863 1939 ntBASIC5.57□□□□□ -1.52
SNRPA1P09661 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNRPA1P09661 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SNRPA1P09661 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.57□□□□□ -1.52
SNRPA1P09661 RNU1-14P-201ENST00000362759 152 ntBASIC5.57□□□□□ -1.52
SNRPA1P09661 Y_RNA.192-201ENST00000363977 102 ntBASIC5.57□□□□□ -1.52
SNRPA1P09661 RNA5SP175-201ENST00000364275 119 ntBASIC5.57□□□□□ -1.52
SNRPA1P09661 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SNRPA1P09661 RN7SKP235-201ENST00000410662 305 ntBASIC5.57□□□□□ -1.52
SNRPA1P09661 SNORA74C-2-201ENST00000411179 201 ntBASIC5.57□□□□□ -1.52
SNRPA1P09661 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC5.57□□□□□ -1.52
SNRPA1P09661 CDY14P-201ENST00000431260 1014 ntBASIC5.57□□□□□ -1.52
SNRPA1P09661 RPL34P6-201ENST00000432390 345 ntBASIC5.57□□□□□ -1.52
SNRPA1P09661 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.57□□□□□ -1.52
SNRPA1P09661 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.57□□□□□ -1.52
SNRPA1P09661 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.57□□□□□ -1.52
SNRPA1P09661 ELOCP8-201ENST00000439309 332 ntBASIC5.57□□□□□ -1.52
SNRPA1P09661 ELOCP15-201ENST00000442090 332 ntBASIC5.57□□□□□ -1.52
SNRPA1P09661 HSFY6P-201ENST00000445573 403 ntBASIC5.57□□□□□ -1.52
SNRPA1P09661 CDY23P-201ENST00000451661 1014 ntBASIC5.57□□□□□ -1.52
SNRPA1P09661 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.57□□□□□ -1.52
SNRPA1P09661 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
SNRPA1P09661 RPL23AP37-201ENST00000479658 549 ntBASIC5.57□□□□□ -1.52
SNRPA1P09661 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.57□□□□□ -1.52
SNRPA1P09661 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SNRPA1P09661 MTCYBP37-201ENST00000510642 1133 ntBASIC5.57□□□□□ -1.52
SNRPA1P09661 AL117351.2-201ENST00000513571 157 ntBASIC5.57□□□□□ -1.52
SNRPA1P09661 RNU6-1004P-201ENST00000516584 111 ntBASIC5.57□□□□□ -1.52
SNRPA1P09661 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.57□□□□□ -1.52
SNRPA1P09661 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.57□□□□□ -1.52
SNRPA1P09661 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.57□□□□□ -1.52
SNRPA1P09661 AC027104.1-201ENST00000563702 681 ntBASIC5.57□□□□□ -1.52
SNRPA1P09661 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.57□□□□□ -1.52
SNRPA1P09661 AL135786.2-201ENST00000608422 615 ntBASIC5.57□□□□□ -1.52
SNRPA1P09661 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC5.57□□□□□ -1.52
SNRPA1P09661 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.57□□□□□ -1.52
SNRPA1P09661 AC006484.1-201ENST00000435086 1884 ntBASIC5.57□□□□□ -1.52
SNRPA1P09661 AC138393.1-206ENST00000540997 1886 ntBASIC5.57□□□□□ -1.52
SNRPA1P09661 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SNRPA1P09661 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNRPA1P09661 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.57□□□□□ -1.52
SNRPA1P09661 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SNRPA1P09661 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SNRPA1P09661 AC093849.1-201ENST00000563631 2209 ntBASIC5.56□□□□□ -1.52
SNRPA1P09661 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNRPA1P09661 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SNRPA1P09661 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms