Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AC026368.1-201ENST00000614934 690 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 AC012414.7-202ENST00000622705 1090 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 AC112694.2-201ENST00000623697 768 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.77□□□□□ -1.49
HMGB1P09429 AL359922.3-201ENST00000624779 1670 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGB1P09429 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
HMGB1P09429 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGB1P09429 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.77□□□□□ -1.49
HMGB1P09429 AC008725.1-201ENST00000605123 2263 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
HMGB1P09429 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGB1P09429 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGB1P09429 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
HMGB1P09429 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC5.76□□□□□ -1.49
HMGB1P09429 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
HMGB1P09429 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.76□□□□□ -1.49
HMGB1P09429 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMGB1P09429 AC008549.2-201ENST00000333482 706 ntBASIC5.76□□□□□ -1.49
HMGB1P09429 RNA5SP507-201ENST00000363603 121 ntBASIC5.76□□□□□ -1.49
HMGB1P09429 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HMGB1P09429 RNU6-878P-201ENST00000384578 110 ntBASIC5.76□□□□□ -1.49
HMGB1P09429 AL450338.1-201ENST00000407987 512 ntBASIC5.76□□□□□ -1.49
HMGB1P09429 U3.35-201ENST00000408405 208 ntBASIC5.76□□□□□ -1.49
HMGB1P09429 RPL23AP27-201ENST00000415161 451 ntBASIC5.76□□□□□ -1.49
HMGB1P09429 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.76□□□□□ -1.49
HMGB1P09429 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.76□□□□□ -1.49
HMGB1P09429 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HMGB1P09429 PSMA6P3-201ENST00000428242 164 ntBASIC5.76□□□□□ -1.49
HMGB1P09429 AL451139.1-201ENST00000434718 346 ntBASIC5.76□□□□□ -1.49
HMGB1P09429 NMNAT1P2-201ENST00000435192 860 ntBASIC5.76□□□□□ -1.49
HMGB1P09429 VN1R54P-201ENST00000435210 1049 ntBASIC5.76□□□□□ -1.49
HMGB1P09429 OR10R1P-201ENST00000441524 1141 ntBASIC5.76□□□□□ -1.49
HMGB1P09429 CEACAMP7-201ENST00000444105 496 ntBASIC5.76□□□□□ -1.49
HMGB1P09429 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.76□□□□□ -1.49
HMGB1P09429 SLC25A18P1-201ENST00000449385 454 ntBASIC5.76□□□□□ -1.49
HMGB1P09429 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.76□□□□□ -1.49
HMGB1P09429 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.76□□□□□ -1.49
HMGB1P09429 HMGN2P7-201ENST00000456186 273 ntBASIC5.76□□□□□ -1.49
HMGB1P09429 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.76□□□□□ -1.49
HMGB1P09429 HMGB3P15-201ENST00000507326 574 ntBASIC5.76□□□□□ -1.49
HMGB1P09429 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.76□□□□□ -1.49
HMGB1P09429 RN7SKP31-201ENST00000516354 278 ntBASIC5.76□□□□□ -1.49
HMGB1P09429 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.76□□□□□ -1.49
HMGB1P09429 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.76□□□□□ -1.49
HMGB1P09429 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.76□□□□□ -1.49
HMGB1P09429 AC091515.1-201ENST00000548110 679 ntBASIC5.76□□□□□ -1.49
HMGB1P09429 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.76□□□□□ -1.49
HMGB1P09429 AADACP1-206ENST00000561502 1193 ntBASIC5.76□□□□□ -1.49
HMGB1P09429 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.76□□□□□ -1.49
HMGB1P09429 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.76□□□□□ -1.49
HMGB1P09429 MAGOH2P-202ENST00000584384 429 ntBASIC5.76□□□□□ -1.49
HMGB1P09429 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.76□□□□□ -1.49
HMGB1P09429 AL121932.1-201ENST00000605542 214 ntBASIC5.76□□□□□ -1.49
HMGB1P09429 AC006023.2-201ENST00000609916 167 ntBASIC5.76□□□□□ -1.49
HMGB1P09429 AC091905.4-201ENST00000623432 202 ntBASIC5.76□□□□□ -1.49
HMGB1P09429 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMGB1P09429 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMGB1P09429 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
HMGB1P09429 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.76□□□□□ -1.49
HMGB1P09429 AC027287.1-201ENST00000553115 1453 ntBASIC5.76□□□□□ -1.49
HMGB1P09429 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMGB1P09429 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMGB1P09429 MAPK10-320ENST00000641462 6696 ntBASIC5.76□□□□□ -1.49
HMGB1P09429 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMGB1P09429 AC107068.1-201ENST00000563286 4218 ntBASIC5.75□□□□□ -1.49
HMGB1P09429 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.75□□□□□ -1.49
HMGB1P09429 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMGB1P09429 AP001486.2-201ENST00000561652 5113 ntBASIC5.75□□□□□ -1.49
HMGB1P09429 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMGB1P09429 AL365440.1-201ENST00000436135 2167 ntBASIC5.75□□□□□ -1.49
HMGB1P09429 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMGB1P09429 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
HMGB1P09429 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HMGB1P09429 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
HMGB1P09429 Y_RNA.408-201ENST00000383987 102 ntBASIC5.75□□□□□ -1.49
HMGB1P09429 LAP3P1-201ENST00000403648 294 ntBASIC5.75□□□□□ -1.49
HMGB1P09429 AL590084.1-201ENST00000407885 387 ntBASIC5.75□□□□□ -1.49
HMGB1P09429 MIR1178-201ENST00000408396 91 ntBASIC5.75□□□□□ -1.49
HMGB1P09429 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.75□□□□□ -1.49
HMGB1P09429 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.75□□□□□ -1.49
HMGB1P09429 PTP4A1P5-201ENST00000420305 455 ntBASIC5.75□□□□□ -1.49
HMGB1P09429 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.75□□□□□ -1.49
HMGB1P09429 RPL34P6-201ENST00000432390 345 ntBASIC5.75□□□□□ -1.49
HMGB1P09429 AL627308.1-201ENST00000435693 821 ntBASIC5.75□□□□□ -1.49
HMGB1P09429 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.75□□□□□ -1.49
HMGB1P09429 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.75□□□□□ -1.49
HMGB1P09429 OFD1P3Y-201ENST00000453312 783 ntBASIC5.75□□□□□ -1.49
HMGB1P09429 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.75□□□□□ -1.49
HMGB1P09429 RPL23AP56-201ENST00000460778 453 ntBASIC5.75□□□□□ -1.49
HMGB1P09429 AC087312.1-201ENST00000471411 480 ntBASIC5.75□□□□□ -1.49
HMGB1P09429 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.75□□□□□ -1.49
HMGB1P09429 UBE2V1P12-201ENST00000503954 474 ntBASIC5.75□□□□□ -1.49
HMGB1P09429 RNA5SP392-201ENST00000516905 112 ntBASIC5.75□□□□□ -1.49
HMGB1P09429 RNU6-709P-201ENST00000517257 104 ntBASIC5.75□□□□□ -1.49
HMGB1P09429 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.75□□□□□ -1.49
HMGB1P09429 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.75□□□□□ -1.49
HMGB1P09429 AC024224.1-201ENST00000538284 609 ntBASIC5.75□□□□□ -1.49
HMGB1P09429 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.75□□□□□ -1.49
HMGB1P09429 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms