Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.76□□□□□ -1.97
CXCL1P09341 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC2.76□□□□□ -1.97
CXCL1P09341 AC068533.1-201ENST00000418542 415 ntBASIC2.76□□□□□ -1.97
CXCL1P09341 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC2.76□□□□□ -1.97
CXCL1P09341 AL513174.1-201ENST00000423182 629 ntBASIC2.76□□□□□ -1.97
CXCL1P09341 AL691449.1-201ENST00000426570 421 ntBASIC2.76□□□□□ -1.97
CXCL1P09341 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CXCL1P09341 AL353898.1-201ENST00000444055 238 ntBASIC2.76□□□□□ -1.97
CXCL1P09341 CCRL1P1-201ENST00000449542 1053 ntBASIC2.76□□□□□ -1.97
CXCL1P09341 ANK3-207ENST00000460468 677 ntTSL 3 BASIC2.76□□□□□ -1.97
CXCL1P09341 AC146507.2-201ENST00000460608 476 ntBASIC2.76□□□□□ -1.97
CXCL1P09341 RPL21P18-201ENST00000469899 480 ntBASIC2.76□□□□□ -1.97
CXCL1P09341 AC074386.1-201ENST00000476560 767 ntBASIC2.76□□□□□ -1.97
CXCL1P09341 UBE2CP3-201ENST00000502715 450 ntBASIC2.76□□□□□ -1.97
CXCL1P09341 AC023141.12-201ENST00000512399 199 ntBASIC2.76□□□□□ -1.97
CXCL1P09341 RNU6-579P-201ENST00000516879 102 ntBASIC2.76□□□□□ -1.97
CXCL1P09341 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC2.76□□□□□ -1.97
CXCL1P09341 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.76□□□□□ -1.97
CXCL1P09341 AP003730.1-201ENST00000524605 285 ntBASIC2.76□□□□□ -1.97
CXCL1P09341 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC2.76□□□□□ -1.97
CXCL1P09341 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.76□□□□□ -1.97
CXCL1P09341 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC2.76□□□□□ -1.97
CXCL1P09341 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC2.76□□□□□ -1.97
CXCL1P09341 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC2.76□□□□□ -1.97
CXCL1P09341 AC105429.2-201ENST00000610567 517 ntBASIC2.76□□□□□ -1.97
CXCL1P09341 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC2.76□□□□□ -1.97
CXCL1P09341 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CXCL1P09341 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.76□□□□□ -1.97
CXCL1P09341 AL121890.3-201ENST00000618494 516 ntBASIC2.76□□□□□ -1.97
CXCL1P09341 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC2.76□□□□□ -1.97
CXCL1P09341 RMST_5.1-201ENST00000618704 126 ntBASIC2.76□□□□□ -1.97
CXCL1P09341 AC110801.1-201ENST00000623590 212 ntBASIC2.76□□□□□ -1.97
CXCL1P09341 MIR4278-201ENST00000636094 69 ntBASIC2.76□□□□□ -1.97
CXCL1P09341 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
CXCL1P09341 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
CXCL1P09341 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.76□□□□□ -1.97
CXCL1P09341 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC2.76□□□□□ -1.97
CXCL1P09341 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.76□□□□□ -1.97
CXCL1P09341 AC005261.4-201ENST00000600047 1385 ntBASIC2.75□□□□□ -1.97
CXCL1P09341 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CXCL1P09341 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CXCL1P09341 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.75□□□□□ -1.97
CXCL1P09341 MIR192-201ENST00000384915 110 ntBASIC2.75□□□□□ -1.97
CXCL1P09341 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.75□□□□□ -1.97
CXCL1P09341 MTND4P22-201ENST00000413116 1169 ntBASIC2.75□□□□□ -1.97
CXCL1P09341 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.75□□□□□ -1.97
CXCL1P09341 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.75□□□□□ -1.97
CXCL1P09341 ELOCP6-201ENST00000429066 328 ntBASIC2.75□□□□□ -1.97
CXCL1P09341 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CXCL1P09341 SETD6P1-201ENST00000444575 317 ntBASIC2.75□□□□□ -1.97
CXCL1P09341 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.75□□□□□ -1.97
CXCL1P09341 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.75□□□□□ -1.97
CXCL1P09341 HMGN2P21-201ENST00000447764 270 ntBASIC2.75□□□□□ -1.97
CXCL1P09341 ELOCP12-201ENST00000458706 328 ntBASIC2.75□□□□□ -1.97
CXCL1P09341 AC013356.1-201ENST00000489027 564 ntBASIC2.75□□□□□ -1.97
CXCL1P09341 AP000563.1-201ENST00000490865 758 ntBASIC2.75□□□□□ -1.97
CXCL1P09341 AC110792.1-201ENST00000491826 472 ntBASIC2.75□□□□□ -1.97
CXCL1P09341 AC093278.1-201ENST00000494700 600 ntBASIC2.75□□□□□ -1.97
CXCL1P09341 AC118282.1-201ENST00000506408 765 ntBASIC2.75□□□□□ -1.97
CXCL1P09341 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC2.75□□□□□ -1.97
CXCL1P09341 AC093840.1-201ENST00000511599 336 ntBASIC2.75□□□□□ -1.97
CXCL1P09341 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC2.75□□□□□ -1.97
CXCL1P09341 AC119751.1-201ENST00000513357 765 ntBASIC2.75□□□□□ -1.97
CXCL1P09341 RNU6-319P-201ENST00000516025 108 ntBASIC2.75□□□□□ -1.97
CXCL1P09341 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC2.75□□□□□ -1.97
CXCL1P09341 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC2.75□□□□□ -1.97
CXCL1P09341 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CXCL1P09341 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.75□□□□□ -1.97
CXCL1P09341 AC026333.2-201ENST00000542164 106 ntBASIC2.75□□□□□ -1.97
CXCL1P09341 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.75□□□□□ -1.97
CXCL1P09341 IGKV2OR2-8-201ENST00000558710 300 ntBASIC2.75□□□□□ -1.97
CXCL1P09341 AC027281.1-201ENST00000574178 758 ntBASIC2.75□□□□□ -1.97
CXCL1P09341 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC2.75□□□□□ -1.97
CXCL1P09341 MIR4506-201ENST00000584693 77 ntBASIC2.75□□□□□ -1.97
CXCL1P09341 NF1P5-201ENST00000588287 448 ntBASIC2.75□□□□□ -1.97
CXCL1P09341 SNORA62.6-201ENST00000606322 83 ntBASIC2.75□□□□□ -1.97
CXCL1P09341 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC2.75□□□□□ -1.97
CXCL1P09341 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.75□□□□□ -1.97
CXCL1P09341 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.75□□□□□ -1.97
CXCL1P09341 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CXCL1P09341 AC093831.2-201ENST00000624393 3427 ntBASIC2.75□□□□□ -1.97
CXCL1P09341 AC073429.2-201ENST00000569694 1444 ntBASIC2.75□□□□□ -1.97
CXCL1P09341 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
CXCL1P09341 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CXCL1P09341 AL672296.1-201ENST00000427780 2158 ntBASIC2.74□□□□□ -1.97
CXCL1P09341 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
CXCL1P09341 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CXCL1P09341 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CXCL1P09341 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CXCL1P09341 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CXCL1P09341 U3.11-201ENST00000364476 212 ntBASIC2.74□□□□□ -1.97
CXCL1P09341 AC240504.1-201ENST00000395709 845 ntBASIC2.74□□□□□ -1.97
CXCL1P09341 HSPE1P26-201ENST00000405341 275 ntBASIC2.74□□□□□ -1.97
CXCL1P09341 HMGB1P13-201ENST00000406019 642 ntBASIC2.74□□□□□ -1.97
CXCL1P09341 AL139128.1-201ENST00000413921 941 ntBASIC2.74□□□□□ -1.97
CXCL1P09341 AC006960.1-201ENST00000419980 153 ntBASIC2.74□□□□□ -1.97
CXCL1P09341 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.74□□□□□ -1.97
CXCL1P09341 AL356276.2-201ENST00000435919 558 ntBASIC2.74□□□□□ -1.97
CXCL1P09341 Z74696.2-201ENST00000436514 498 ntBASIC2.74□□□□□ -1.97
CXCL1P09341 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms