Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AL353898.1-201ENST00000444055 238 ntBASIC3.75□□□□□ -1.81
HOXC4P09017 EXTL2P1-201ENST00000446218 416 ntBASIC3.75□□□□□ -1.81
HOXC4P09017 AC006480.1-201ENST00000449887 378 ntBASIC3.75□□□□□ -1.81
HOXC4P09017 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.75□□□□□ -1.81
HOXC4P09017 CDH12P2-201ENST00000504393 298 ntBASIC3.75□□□□□ -1.81
HOXC4P09017 USP9YP5-201ENST00000511770 630 ntBASIC3.75□□□□□ -1.81
HOXC4P09017 SNORD116-26-201ENST00000516006 96 ntBASIC3.75□□□□□ -1.81
HOXC4P09017 RNU1-95P-201ENST00000516357 160 ntBASIC3.75□□□□□ -1.81
HOXC4P09017 RNU1-128P-201ENST00000516704 160 ntBASIC3.75□□□□□ -1.81
HOXC4P09017 RNU6-467P-201ENST00000517027 110 ntBASIC3.75□□□□□ -1.81
HOXC4P09017 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.75□□□□□ -1.81
HOXC4P09017 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.75□□□□□ -1.81
HOXC4P09017 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.75□□□□□ -1.81
HOXC4P09017 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXC4P09017 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXC4P09017 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXC4P09017 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.75□□□□□ -1.81
HOXC4P09017 AC009268.1-201ENST00000561352 1203 ntBASIC3.75□□□□□ -1.81
HOXC4P09017 MIR4429-201ENST00000580105 73 ntBASIC3.75□□□□□ -1.81
HOXC4P09017 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.75□□□□□ -1.81
HOXC4P09017 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.75□□□□□ -1.81
HOXC4P09017 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.75□□□□□ -1.81
HOXC4P09017 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.75□□□□□ -1.81
HOXC4P09017 SNORA62.6-201ENST00000606322 83 ntBASIC3.75□□□□□ -1.81
HOXC4P09017 SNORA51-201ENST00000606420 132 ntBASIC3.75□□□□□ -1.81
HOXC4P09017 AC017076.1-201ENST00000607613 578 ntBASIC3.75□□□□□ -1.81
HOXC4P09017 AL391834.1-201ENST00000609609 560 ntBASIC3.75□□□□□ -1.81
HOXC4P09017 AL392048.1-201ENST00000613946 534 ntBASIC3.75□□□□□ -1.81
HOXC4P09017 AC009318.3-201ENST00000616916 503 ntBASIC3.75□□□□□ -1.81
HOXC4P09017 AC016957.2-201ENST00000616998 848 ntBASIC3.75□□□□□ -1.81
HOXC4P09017 uc_338.9-201ENST00000617424 182 ntBASIC3.75□□□□□ -1.81
HOXC4P09017 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXC4P09017 MIR6075-201ENST00000620782 95 ntBASIC3.75□□□□□ -1.81
HOXC4P09017 AP002371.2-201ENST00000624450 503 ntBASIC3.75□□□□□ -1.81
HOXC4P09017 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
HOXC4P09017 AL049555.1-201ENST00000562834 1933 ntBASIC3.75□□□□□ -1.81
HOXC4P09017 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
HOXC4P09017 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HOXC4P09017 MTND4P10-201ENST00000446199 1363 ntBASIC3.75□□□□□ -1.81
HOXC4P09017 AC096656.1-201ENST00000623826 1364 ntBASIC3.75□□□□□ -1.81
HOXC4P09017 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
HOXC4P09017 HSPA8P1-201ENST00000425843 1833 ntBASIC3.74□□□□□ -1.81
HOXC4P09017 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
HOXC4P09017 LINC02471-203ENST00000641941 4752 ntBASIC3.74□□□□□ -1.81
HOXC4P09017 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HOXC4P09017 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.74□□□□□ -1.81
HOXC4P09017 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HOXC4P09017 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.74□□□□□ -1.81
HOXC4P09017 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HOXC4P09017 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
HOXC4P09017 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HOXC4P09017 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HOXC4P09017 RNA5SP124-201ENST00000362739 110 ntBASIC3.74□□□□□ -1.81
HOXC4P09017 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.74□□□□□ -1.81
HOXC4P09017 AL359837.1-201ENST00000381357 287 ntBASIC3.74□□□□□ -1.81
HOXC4P09017 MIR23B-201ENST00000384832 97 ntBASIC3.74□□□□□ -1.81
HOXC4P09017 MIR7-1-201ENST00000384871 110 ntBASIC3.74□□□□□ -1.81
HOXC4P09017 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HOXC4P09017 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.74□□□□□ -1.81
HOXC4P09017 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HOXC4P09017 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.74□□□□□ -1.81
HOXC4P09017 AL606490.7-201ENST00000433136 191 ntBASIC3.74□□□□□ -1.81
HOXC4P09017 BMS1P19-201ENST00000433925 393 ntBASIC3.74□□□□□ -1.81
HOXC4P09017 MTCO3P43-201ENST00000440974 771 ntBASIC3.74□□□□□ -1.81
HOXC4P09017 VN1R34P-201ENST00000447387 883 ntBASIC3.74□□□□□ -1.81
HOXC4P09017 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.74□□□□□ -1.81
HOXC4P09017 UBDP1-202ENST00000457888 382 ntBASIC3.74□□□□□ -1.81
HOXC4P09017 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.74□□□□□ -1.81
HOXC4P09017 AC084198.1-201ENST00000477747 402 ntBASIC3.74□□□□□ -1.81
HOXC4P09017 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.74□□□□□ -1.81
HOXC4P09017 SLC25A15P5-201ENST00000508033 253 ntBASIC3.74□□□□□ -1.81
HOXC4P09017 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.74□□□□□ -1.81
HOXC4P09017 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.74□□□□□ -1.81
HOXC4P09017 AC108120.2-201ENST00000512973 294 ntBASIC3.74□□□□□ -1.81
HOXC4P09017 AC090877.1-201ENST00000561418 344 ntBASIC3.74□□□□□ -1.81
HOXC4P09017 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.74□□□□□ -1.81
HOXC4P09017 AL137849.1-201ENST00000604767 169 ntBASIC3.74□□□□□ -1.81
HOXC4P09017 AP003392.5-201ENST00000607857 415 ntBASIC3.74□□□□□ -1.81
HOXC4P09017 AC233309.1-201ENST00000619522 751 ntBASIC3.74□□□□□ -1.81
HOXC4P09017 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
HOXC4P09017 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.74□□□□□ -1.81
HOXC4P09017 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HOXC4P09017 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.74□□□□□ -1.81
HOXC4P09017 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.74□□□□□ -1.81
HOXC4P09017 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HOXC4P09017 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.74□□□□□ -1.81
HOXC4P09017 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
HOXC4P09017 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HOXC4P09017 AL359715.4-201ENST00000606629 1436 ntBASIC3.73□□□□□ -1.81
HOXC4P09017 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
HOXC4P09017 SNORA62.2-201ENST00000364672 152 ntBASIC3.73□□□□□ -1.81
HOXC4P09017 RPL21P17-201ENST00000397467 475 ntBASIC3.73□□□□□ -1.81
HOXC4P09017 Z98941.1-201ENST00000407764 100 ntBASIC3.73□□□□□ -1.81
HOXC4P09017 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.73□□□□□ -1.81
HOXC4P09017 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXC4P09017 AL389915.1-201ENST00000422463 466 ntBASIC3.73□□□□□ -1.81
HOXC4P09017 SEC63P1-201ENST00000425785 1258 ntBASIC3.73□□□□□ -1.81
HOXC4P09017 NPM1P24-201ENST00000428039 894 ntBASIC3.73□□□□□ -1.81
HOXC4P09017 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXC4P09017 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms