Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.8□□□□□ -1.8
SFTPBP07988 AC012671.1-201ENST00000451912 203 ntBASIC3.8□□□□□ -1.8
SFTPBP07988 DDX39BP2-208ENST00000453923 258 ntBASIC3.8□□□□□ -1.8
SFTPBP07988 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.8□□□□□ -1.8
SFTPBP07988 NF1P3-201ENST00000457709 450 ntBASIC3.8□□□□□ -1.8
SFTPBP07988 S100A11P1-201ENST00000477525 312 ntBASIC3.8□□□□□ -1.8
SFTPBP07988 AP000926.1-201ENST00000479573 241 ntBASIC3.8□□□□□ -1.8
SFTPBP07988 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SFTPBP07988 AC025445.1-201ENST00000502728 300 ntBASIC3.8□□□□□ -1.8
SFTPBP07988 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SFTPBP07988 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SFTPBP07988 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.8□□□□□ -1.8
SFTPBP07988 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.8□□□□□ -1.8
SFTPBP07988 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.8□□□□□ -1.8
SFTPBP07988 AC018797.3-201ENST00000513388 1241 ntBASIC3.8□□□□□ -1.8
SFTPBP07988 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SFTPBP07988 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.8□□□□□ -1.8
SFTPBP07988 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.8□□□□□ -1.8
SFTPBP07988 AC034205.1-201ENST00000520621 638 ntBASIC3.8□□□□□ -1.8
SFTPBP07988 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.8□□□□□ -1.8
SFTPBP07988 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.8□□□□□ -1.8
SFTPBP07988 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SFTPBP07988 OR8L1P-201ENST00000534005 955 ntBASIC3.8□□□□□ -1.8
SFTPBP07988 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.8□□□□□ -1.8
SFTPBP07988 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.8□□□□□ -1.8
SFTPBP07988 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.8□□□□□ -1.8
SFTPBP07988 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.8□□□□□ -1.8
SFTPBP07988 AC069061.3-201ENST00000582254 823 ntBASIC3.8□□□□□ -1.8
SFTPBP07988 AC022069.1-201ENST00000582910 658 ntBASIC3.8□□□□□ -1.8
SFTPBP07988 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.8□□□□□ -1.8
SFTPBP07988 MIR5096-201ENST00000583713 70 ntBASIC3.8□□□□□ -1.8
SFTPBP07988 MIR4715-201ENST00000584117 79 ntBASIC3.8□□□□□ -1.8
SFTPBP07988 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.8□□□□□ -1.8
SFTPBP07988 OR1AB1P-201ENST00000585564 761 ntBASIC3.8□□□□□ -1.8
SFTPBP07988 RPL12P25-202ENST00000598100 674 ntBASIC3.8□□□□□ -1.8
SFTPBP07988 RPAP2P1-201ENST00000603626 1168 ntBASIC3.8□□□□□ -1.8
SFTPBP07988 AC112503.1-201ENST00000608436 391 ntBASIC3.8□□□□□ -1.8
SFTPBP07988 AL109620.1-201ENST00000618738 1197 ntBASIC3.8□□□□□ -1.8
SFTPBP07988 VN1R7P-201ENST00000619242 903 ntBASIC3.8□□□□□ -1.8
SFTPBP07988 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SFTPBP07988 AL049536.1-201ENST00000625043 744 ntBASIC3.8□□□□□ -1.8
SFTPBP07988 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.8□□□□□ -1.8
SFTPBP07988 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.8□□□□□ -1.8
SFTPBP07988 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SFTPBP07988 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.8□□□□□ -1.8
SFTPBP07988 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
SFTPBP07988 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SFTPBP07988 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SFTPBP07988 MTND5P28-201ENST00000438005 1594 ntBASIC3.8□□□□□ -1.8
SFTPBP07988 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.8□□□□□ -1.8
SFTPBP07988 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SFTPBP07988 AC025125.1-201ENST00000624743 1922 ntBASIC3.8□□□□□ -1.8
SFTPBP07988 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SFTPBP07988 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SFTPBP07988 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SFTPBP07988 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.79□□□□□ -1.8
SFTPBP07988 ELL2P4-201ENST00000446870 1376 ntBASIC3.79□□□□□ -1.8
SFTPBP07988 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.79□□□□□ -1.8
SFTPBP07988 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SFTPBP07988 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SFTPBP07988 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
SFTPBP07988 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
SFTPBP07988 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SFTPBP07988 RNA5SP307-201ENST00000362863 116 ntBASIC3.79□□□□□ -1.8
SFTPBP07988 SNORA70.2-201ENST00000364506 135 ntBASIC3.79□□□□□ -1.8
SFTPBP07988 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SFTPBP07988 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.79□□□□□ -1.8
SFTPBP07988 AC096533.1-201ENST00000411645 353 ntBASIC3.79□□□□□ -1.8
SFTPBP07988 LIPT1P1-201ENST00000415870 1186 ntBASIC3.79□□□□□ -1.8
SFTPBP07988 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.79□□□□□ -1.8
SFTPBP07988 UQCRBP1-201ENST00000421129 336 ntBASIC3.79□□□□□ -1.8
SFTPBP07988 AC009237.2-201ENST00000421358 284 ntBASIC3.79□□□□□ -1.8
SFTPBP07988 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.79□□□□□ -1.8
SFTPBP07988 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.79□□□□□ -1.8
SFTPBP07988 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.79□□□□□ -1.8
SFTPBP07988 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.79□□□□□ -1.8
SFTPBP07988 NANOGP6-201ENST00000429190 847 ntBASIC3.79□□□□□ -1.8
SFTPBP07988 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.79□□□□□ -1.8
SFTPBP07988 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.79□□□□□ -1.8
SFTPBP07988 CKS1BP5-201ENST00000434172 273 ntBASIC3.79□□□□□ -1.8
SFTPBP07988 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.79□□□□□ -1.8
SFTPBP07988 HLA-N-201ENST00000437516 135 ntBASIC3.79□□□□□ -1.8
SFTPBP07988 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.79□□□□□ -1.8
SFTPBP07988 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.79□□□□□ -1.8
SFTPBP07988 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.79□□□□□ -1.8
SFTPBP07988 RPL23AP43-201ENST00000446445 471 ntBASIC3.79□□□□□ -1.8
SFTPBP07988 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.79□□□□□ -1.8
SFTPBP07988 AC009963.2-201ENST00000453431 138 ntBASIC3.79□□□□□ -1.8
SFTPBP07988 AC244505.3-201ENST00000454598 187 ntBASIC3.79□□□□□ -1.8
SFTPBP07988 AC012170.1-201ENST00000495139 359 ntBASIC3.79□□□□□ -1.8
SFTPBP07988 AC026414.1-201ENST00000504046 698 ntBASIC3.79□□□□□ -1.8
SFTPBP07988 AC069306.1-201ENST00000507006 843 ntBASIC3.79□□□□□ -1.8
SFTPBP07988 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SFTPBP07988 AC118282.2-201ENST00000508739 374 ntBASIC3.79□□□□□ -1.8
SFTPBP07988 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SFTPBP07988 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.79□□□□□ -1.8
SFTPBP07988 PTGES3P3-201ENST00000511479 482 ntBASIC3.79□□□□□ -1.8
SFTPBP07988 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.79□□□□□ -1.8
SFTPBP07988 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.79□□□□□ -1.8
SFTPBP07988 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms