Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.98□□□□□ -1.93
CTSDP07339 TMED11P-201ENST00000479478 690 ntBASIC2.98□□□□□ -1.93
CTSDP07339 AC021205.2-201ENST00000480069 347 ntBASIC2.98□□□□□ -1.93
CTSDP07339 AP000563.1-201ENST00000490865 758 ntBASIC2.98□□□□□ -1.93
CTSDP07339 UBE2CP3-201ENST00000502715 450 ntBASIC2.98□□□□□ -1.93
CTSDP07339 PRELID3BP5-201ENST00000508612 460 ntBASIC2.98□□□□□ -1.93
CTSDP07339 SNORA70.19-201ENST00000516717 90 ntBASIC2.98□□□□□ -1.93
CTSDP07339 RGS5-218ENST00000526176 574 ntTSL 4 BASIC2.98□□□□□ -1.93
CTSDP07339 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CTSDP07339 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC2.98□□□□□ -1.93
CTSDP07339 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC2.98□□□□□ -1.93
CTSDP07339 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC2.98□□□□□ -1.93
CTSDP07339 AL606490.9-201ENST00000603331 271 ntBASIC2.98□□□□□ -1.93
CTSDP07339 AL357559.1-201ENST00000622228 274 ntBASIC2.98□□□□□ -1.93
CTSDP07339 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.98□□□□□ -1.93
CTSDP07339 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC2.98□□□□□ -1.93
CTSDP07339 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC2.98□□□□□ -1.93
CTSDP07339 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC2.98□□□□□ -1.93
CTSDP07339 AC092326.2-201ENST00000624772 1561 ntBASIC2.98□□□□□ -1.93
CTSDP07339 AL513302.2-201ENST00000562313 1842 ntBASIC2.98□□□□□ -1.93
CTSDP07339 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CTSDP07339 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CTSDP07339 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CTSDP07339 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CTSDP07339 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CTSDP07339 RNU6-673P-201ENST00000365084 104 ntBASIC2.97□□□□□ -1.93
CTSDP07339 RNA5SP283-201ENST00000365604 119 ntBASIC2.97□□□□□ -1.93
CTSDP07339 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC2.97□□□□□ -1.93
CTSDP07339 SNORA3.3-201ENST00000408712 125 ntBASIC2.97□□□□□ -1.93
CTSDP07339 RNA5SP107-201ENST00000411358 122 ntBASIC2.97□□□□□ -1.93
CTSDP07339 RANP4-201ENST00000413361 655 ntBASIC2.97□□□□□ -1.93
CTSDP07339 AC093578.1-201ENST00000415219 368 ntBASIC2.97□□□□□ -1.93
CTSDP07339 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC2.97□□□□□ -1.93
CTSDP07339 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.97□□□□□ -1.93
CTSDP07339 AL513174.1-201ENST00000423182 629 ntBASIC2.97□□□□□ -1.93
CTSDP07339 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.97□□□□□ -1.93
CTSDP07339 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC2.97□□□□□ -1.93
CTSDP07339 AP000907.1-201ENST00000428428 510 ntBASIC2.97□□□□□ -1.93
CTSDP07339 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC2.97□□□□□ -1.93
CTSDP07339 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.97□□□□□ -1.93
CTSDP07339 RPL21P89-201ENST00000444021 467 ntBASIC2.97□□□□□ -1.93
CTSDP07339 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC2.97□□□□□ -1.93
CTSDP07339 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC2.97□□□□□ -1.93
CTSDP07339 AC103987.1-201ENST00000473394 348 ntBASIC2.97□□□□□ -1.93
CTSDP07339 TRBV8-2-201ENST00000475637 270 ntBASIC2.97□□□□□ -1.93
CTSDP07339 AC068587.1-201ENST00000483613 781 ntBASIC2.97□□□□□ -1.93
CTSDP07339 FTH1P21-201ENST00000512179 511 ntBASIC2.97□□□□□ -1.93
CTSDP07339 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC2.97□□□□□ -1.93
CTSDP07339 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC2.97□□□□□ -1.93
CTSDP07339 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC2.97□□□□□ -1.93
CTSDP07339 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CTSDP07339 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CTSDP07339 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC2.97□□□□□ -1.93
CTSDP07339 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC2.97□□□□□ -1.93
CTSDP07339 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC2.97□□□□□ -1.93
CTSDP07339 MIR8058-201ENST00000615737 89 ntBASIC2.97□□□□□ -1.93
CTSDP07339 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
CTSDP07339 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CTSDP07339 AC138915.3-201ENST00000562908 1389 ntBASIC2.97□□□□□ -1.93
CTSDP07339 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CTSDP07339 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
CTSDP07339 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CTSDP07339 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CTSDP07339 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CTSDP07339 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
CTSDP07339 SNORA73.2-201ENST00000364946 201 ntBASIC2.96□□□□□ -1.94
CTSDP07339 RNU6-805P-201ENST00000365643 106 ntBASIC2.96□□□□□ -1.94
CTSDP07339 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.96□□□□□ -1.94
CTSDP07339 SMC4P1-201ENST00000414479 527 ntBASIC2.96□□□□□ -1.94
CTSDP07339 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC2.96□□□□□ -1.94
CTSDP07339 AC092832.1-201ENST00000422934 400 ntBASIC2.96□□□□□ -1.94
CTSDP07339 OR8F1P-201ENST00000425243 930 ntBASIC2.96□□□□□ -1.94
CTSDP07339 NIPA2P1-201ENST00000426223 976 ntBASIC2.96□□□□□ -1.94
CTSDP07339 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.96□□□□□ -1.94
CTSDP07339 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC2.96□□□□□ -1.94
CTSDP07339 NUTF2P7-201ENST00000453086 375 ntBASIC2.96□□□□□ -1.94
CTSDP07339 TVP23BP2-201ENST00000455082 615 ntBASIC2.96□□□□□ -1.94
CTSDP07339 HNRNPDLP3-201ENST00000456745 380 ntBASIC2.96□□□□□ -1.94
CTSDP07339 UBDP1-202ENST00000457888 382 ntBASIC2.96□□□□□ -1.94
CTSDP07339 SNRPGP3-201ENST00000469405 227 ntBASIC2.96□□□□□ -1.94
CTSDP07339 RN7SL594P-201ENST00000470590 287 ntBASIC2.96□□□□□ -1.94
CTSDP07339 AC093267.1-201ENST00000489176 961 ntBASIC2.96□□□□□ -1.94
CTSDP07339 SETP14-201ENST00000497538 873 ntBASIC2.96□□□□□ -1.94
CTSDP07339 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC2.96□□□□□ -1.94
CTSDP07339 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.96□□□□□ -1.94
CTSDP07339 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC2.96□□□□□ -1.94
CTSDP07339 AC108064.1-201ENST00000513791 460 ntBASIC2.96□□□□□ -1.94
CTSDP07339 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.96□□□□□ -1.94
CTSDP07339 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.96□□□□□ -1.94
CTSDP07339 MIR2276-201ENST00000516886 89 ntBASIC2.96□□□□□ -1.94
CTSDP07339 SCARNA14-201ENST00000516903 136 ntBASIC2.96□□□□□ -1.94
CTSDP07339 RN7SKP289-201ENST00000517244 295 ntBASIC2.96□□□□□ -1.94
CTSDP07339 NPM1P52-201ENST00000518264 846 ntBASIC2.96□□□□□ -1.94
CTSDP07339 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC2.96□□□□□ -1.94
CTSDP07339 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC2.96□□□□□ -1.94
CTSDP07339 OR8R1P-201ENST00000543943 764 ntBASIC2.96□□□□□ -1.94
CTSDP07339 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CTSDP07339 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC2.96□□□□□ -1.94
CTSDP07339 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.96□□□□□ -1.94
CTSDP07339 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms