Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
COL4A1P02462 AC005261.6-201ENST00000623072 1387 ntBASIC4□□□□□ -1.77
COL4A1P02462 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL4A1P02462 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
COL4A1P02462 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL4A1P02462 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.99□□□□□ -1.77
COL4A1P02462 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL4A1P02462 SNORD67-201ENST00000390833 111 ntBASIC3.99□□□□□ -1.77
COL4A1P02462 HMGB3P18-201ENST00000406327 590 ntBASIC3.99□□□□□ -1.77
COL4A1P02462 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.99□□□□□ -1.77
COL4A1P02462 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.99□□□□□ -1.77
COL4A1P02462 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.99□□□□□ -1.77
COL4A1P02462 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.99□□□□□ -1.77
COL4A1P02462 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.99□□□□□ -1.77
COL4A1P02462 AC004024.1-201ENST00000549244 247 ntBASIC3.99□□□□□ -1.77
COL4A1P02462 AC106785.3-201ENST00000564064 847 ntBASIC3.99□□□□□ -1.77
COL4A1P02462 AP005262.1-201ENST00000582646 997 ntBASIC3.99□□□□□ -1.77
COL4A1P02462 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.99□□□□□ -1.77
COL4A1P02462 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
COL4A1P02462 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL4A1P02462 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL4A1P02462 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL4A1P02462 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
COL4A1P02462 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL4A1P02462 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL4A1P02462 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.98□□□□□ -1.77
COL4A1P02462 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.98□□□□□ -1.77
COL4A1P02462 ETF1P3-201ENST00000430422 1160 ntBASIC3.98□□□□□ -1.77
COL4A1P02462 MRPS31P2-201ENST00000451581 518 ntBASIC3.98□□□□□ -1.77
COL4A1P02462 AC110794.1-201ENST00000505816 425 ntBASIC3.98□□□□□ -1.77
COL4A1P02462 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.98□□□□□ -1.77
COL4A1P02462 MIR4738-201ENST00000579134 87 ntBASIC3.98□□□□□ -1.77
COL4A1P02462 MIR4433B-201ENST00000581329 102 ntBASIC3.98□□□□□ -1.77
COL4A1P02462 AC005242.1-201ENST00000585658 438 ntBASIC3.98□□□□□ -1.77
COL4A1P02462 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.98□□□□□ -1.77
COL4A1P02462 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.98□□□□□ -1.77
COL4A1P02462 uc_338.25-201ENST00000613756 156 ntBASIC3.98□□□□□ -1.77
COL4A1P02462 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.98□□□□□ -1.77
COL4A1P02462 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
COL4A1P02462 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
COL4A1P02462 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL4A1P02462 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL4A1P02462 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.98□□□□□ -1.77
COL4A1P02462 FAM35DP-201ENST00000323387 2712 ntBASIC3.97□□□□□ -1.77
COL4A1P02462 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
COL4A1P02462 RNU1-89P-201ENST00000384592 164 ntBASIC3.97□□□□□ -1.77
COL4A1P02462 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
COL4A1P02462 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.97□□□□□ -1.77
COL4A1P02462 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC3.97□□□□□ -1.77
COL4A1P02462 ACTG1P13-201ENST00000486987 1043 ntBASIC3.97□□□□□ -1.77
COL4A1P02462 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.97□□□□□ -1.77
COL4A1P02462 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.97□□□□□ -1.77
COL4A1P02462 PCBP2P3-201ENST00000509726 843 ntBASIC3.97□□□□□ -1.77
COL4A1P02462 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.97□□□□□ -1.77
COL4A1P02462 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.97□□□□□ -1.77
COL4A1P02462 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.97□□□□□ -1.77
COL4A1P02462 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.97□□□□□ -1.77
COL4A1P02462 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.97□□□□□ -1.77
COL4A1P02462 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
COL4A1P02462 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.97□□□□□ -1.77
COL4A1P02462 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.97□□□□□ -1.77
COL4A1P02462 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL4A1P02462 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.97□□□□□ -1.77
COL4A1P02462 AL451142.2-201ENST00000429076 2090 ntBASIC3.97□□□□□ -1.77
COL4A1P02462 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.97□□□□□ -1.77
COL4A1P02462 AP003122.5-201ENST00000527668 3766 ntBASIC3.97□□□□□ -1.77
COL4A1P02462 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC3.97□□□□□ -1.77
COL4A1P02462 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.97□□□□□ -1.77
COL4A1P02462 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.97□□□□□ -1.77
COL4A1P02462 RPS3AP43-201ENST00000479743 781 ntBASIC3.97□□□□□ -1.77
COL4A1P02462 AC010374.2-201ENST00000512933 535 ntBASIC3.97□□□□□ -1.77
COL4A1P02462 AC087888.1-201ENST00000550884 1254 ntBASIC3.97□□□□□ -1.77
COL4A1P02462 AC006557.5-201ENST00000603126 811 ntBASIC3.97□□□□□ -1.77
COL4A1P02462 AC093732.2-201ENST00000607950 274 ntBASIC3.97□□□□□ -1.77
COL4A1P02462 AL359715.5-201ENST00000623431 443 ntBASIC3.97□□□□□ -1.77
COL4A1P02462 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.97□□□□□ -1.77
COL4A1P02462 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
COL4A1P02462 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.96□□□□□ -1.77
COL4A1P02462 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
COL4A1P02462 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL4A1P02462 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
COL4A1P02462 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.96□□□□□ -1.78
COL4A1P02462 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL4A1P02462 AL031595.2-201ENST00000624215 19071 ntBASIC3.96□□□□□ -1.78
COL4A1P02462 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL4A1P02462 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.96□□□□□ -1.78
COL4A1P02462 RNU6-729P-201ENST00000384399 107 ntBASIC3.96□□□□□ -1.78
COL4A1P02462 TAF9BP1-201ENST00000396646 746 ntBASIC3.96□□□□□ -1.78
COL4A1P02462 RNU4-47P-201ENST00000410876 114 ntBASIC3.96□□□□□ -1.78
COL4A1P02462 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.96□□□□□ -1.78
COL4A1P02462 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
COL4A1P02462 AC004552.1-201ENST00000419089 348 ntBASIC3.96□□□□□ -1.78
COL4A1P02462 AL353678.1-201ENST00000422735 741 ntBASIC3.96□□□□□ -1.78
COL4A1P02462 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.96□□□□□ -1.78
COL4A1P02462 AC107083.1-201ENST00000439643 279 ntBASIC3.96□□□□□ -1.78
COL4A1P02462 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.96□□□□□ -1.78
COL4A1P02462 AC090543.2-201ENST00000483963 348 ntBASIC3.96□□□□□ -1.78
COL4A1P02462 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.96□□□□□ -1.78
COL4A1P02462 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.96□□□□□ -1.78
COL4A1P02462 FTH1P9-201ENST00000513251 355 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms