Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AL157770.1-201ENST00000623049 439 ntBASIC5.27□□□□□ -1.57
COL3A1P02461 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC5.27□□□□□ -1.57
COL3A1P02461 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.27□□□□□ -1.57
COL3A1P02461 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.27□□□□□ -1.57
COL3A1P02461 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL3A1P02461 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.27□□□□□ -1.57
COL3A1P02461 AC016588.2-201ENST00000632484 3021 ntBASIC5.27□□□□□ -1.57
COL3A1P02461 CYP1D1P-201ENST00000416662 1433 ntBASIC5.27□□□□□ -1.57
COL3A1P02461 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL3A1P02461 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.27□□□□□ -1.57
COL3A1P02461 SPATA31D2P-201ENST00000429999 4388 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 RNU6-618P-201ENST00000363518 112 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL3A1P02461 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.26□□□□□ -1.57
COL3A1P02461 UBE2V1P9-201ENST00000414760 368 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 VN1R31P-201ENST00000417498 730 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.26□□□□□ -1.57
COL3A1P02461 OR4F13P-201ENST00000428478 931 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.26□□□□□ -1.57
COL3A1P02461 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.26□□□□□ -1.57
COL3A1P02461 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.26□□□□□ -1.57
COL3A1P02461 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.26□□□□□ -1.57
COL3A1P02461 HMGB1P38-201ENST00000490557 577 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 AC112518.2-201ENST00000508565 425 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 RNA5SP143-201ENST00000516936 115 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL3A1P02461 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL3A1P02461 AC011270.1-201ENST00000558606 583 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC5.26□□□□□ -1.57
COL3A1P02461 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.26□□□□□ -1.57
COL3A1P02461 AL353778.1-201ENST00000603149 408 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 AC079684.1-201ENST00000621405 437 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 AP000676.3-201ENST00000623299 569 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 AC124312.6-202ENST00000623624 418 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 AC112200.1-201ENST00000625015 234 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 AF001550.2-201ENST00000636643 217 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 FAM91A3P-201ENST00000456826 2544 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL3A1P02461 AC090220.1-201ENST00000593078 1699 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 AC006971.1-201ENST00000407916 4486 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.26□□□□□ -1.57
COL3A1P02461 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL3A1P02461 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
COL3A1P02461 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.26□□□□□ -1.57
COL3A1P02461 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL3A1P02461 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL3A1P02461 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
COL3A1P02461 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.26□□□□□ -1.57
COL3A1P02461 SOD2P1-201ENST00000396543 562 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5.26□□□□□ -1.57
COL3A1P02461 RAD23BP2-201ENST00000416003 1207 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.26□□□□□ -1.57
COL3A1P02461 HMGB1P49-201ENST00000418882 569 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 AC005345.1-201ENST00000431868 217 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.26□□□□□ -1.57
COL3A1P02461 PTP4A1P3-201ENST00000433661 420 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 MTCYBP29-201ENST00000436327 1006 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.26□□□□□ -1.57
COL3A1P02461 AC118469.1-201ENST00000442943 488 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.26□□□□□ -1.57
COL3A1P02461 MTND2P19-201ENST00000449129 1012 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 HMGB1P26-201ENST00000452520 628 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 AC073387.1-201ENST00000453261 709 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.26□□□□□ -1.57
COL3A1P02461 RPS17P11-201ENST00000474297 293 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL3A1P02461 RPS3AP22-201ENST00000488297 769 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 AC134050.1-201ENST00000495088 933 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 AC146944.2-203ENST00000502493 354 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 AC139495.1-202ENST00000513164 354 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.26□□□□□ -1.57
COL3A1P02461 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.26□□□□□ -1.57
COL3A1P02461 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.26□□□□□ -1.57
COL3A1P02461 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.26□□□□□ -1.57
COL3A1P02461 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.26□□□□□ -1.57
COL3A1P02461 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.26□□□□□ -1.57
COL3A1P02461 AC084373.1-201ENST00000603311 235 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.26□□□□□ -1.57
COL3A1P02461 AC104073.3-201ENST00000610942 955 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 AC116165.2-201ENST00000616705 206 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 AL645927.2-201ENST00000618350 349 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 AP003499.2-201ENST00000624100 483 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 AC092159.4-201ENST00000624944 550 ntBASIC5.26□□□□□ -1.57
COL3A1P02461 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL3A1P02461 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.25□□□□□ -1.57
COL3A1P02461 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL3A1P02461 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL3A1P02461 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
COL3A1P02461 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL3A1P02461 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL3A1P02461 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
COL3A1P02461 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL3A1P02461 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL3A1P02461 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL3A1P02461 MIR16-2-201ENST00000362117 81 ntBASIC5.25□□□□□ -1.57
COL3A1P02461 RNU6-40P-201ENST00000384254 107 ntBASIC5.25□□□□□ -1.57
COL3A1P02461 RNU6-1320P-201ENST00000390838 107 ntBASIC5.25□□□□□ -1.57
COL3A1P02461 RNU6-1269P-201ENST00000391139 107 ntBASIC5.25□□□□□ -1.57
COL3A1P02461 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms