Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.91□□□□□ -1.94
IFNA1P01562 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC2.91□□□□□ -1.94
IFNA1P01562 AC010285.3-201ENST00000511668 676 ntBASIC2.91□□□□□ -1.94
IFNA1P01562 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.91□□□□□ -1.94
IFNA1P01562 IGKV2D-10-201ENST00000520194 281 ntBASIC2.91□□□□□ -1.94
IFNA1P01562 HIGD1AP18-201ENST00000520730 278 ntBASIC2.91□□□□□ -1.94
IFNA1P01562 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC2.91□□□□□ -1.94
IFNA1P01562 MTCO1P49-201ENST00000523429 802 ntBASIC2.91□□□□□ -1.94
IFNA1P01562 AP001922.4-201ENST00000526967 290 ntBASIC2.91□□□□□ -1.94
IFNA1P01562 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
IFNA1P01562 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC2.91□□□□□ -1.94
IFNA1P01562 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC2.91□□□□□ -1.94
IFNA1P01562 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC2.91□□□□□ -1.94
IFNA1P01562 MIR4474-201ENST00000579189 78 ntBASIC2.91□□□□□ -1.94
IFNA1P01562 MIR4270-201ENST00000581799 70 ntBASIC2.91□□□□□ -1.94
IFNA1P01562 AL445222.1-201ENST00000607259 628 ntBASIC2.91□□□□□ -1.94
IFNA1P01562 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
IFNA1P01562 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
IFNA1P01562 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.91□□□□□ -1.94
IFNA1P01562 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.91□□□□□ -1.94
IFNA1P01562 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.91□□□□□ -1.94
IFNA1P01562 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
IFNA1P01562 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
IFNA1P01562 API5-210ENST00000534600 1760 ntTSL 5 BASIC2.9□□□□□ -1.94
IFNA1P01562 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.9□□□□□ -1.94
IFNA1P01562 AC073073.2-201ENST00000609827 2578 ntBASIC2.9□□□□□ -1.94
IFNA1P01562 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
IFNA1P01562 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
IFNA1P01562 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
IFNA1P01562 RNU6-244P-201ENST00000391028 104 ntBASIC2.9□□□□□ -1.95
IFNA1P01562 RNA5SP293-201ENST00000410527 113 ntBASIC2.9□□□□□ -1.95
IFNA1P01562 RNA5SP31-201ENST00000411144 127 ntBASIC2.9□□□□□ -1.95
IFNA1P01562 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.9□□□□□ -1.95
IFNA1P01562 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.9□□□□□ -1.95
IFNA1P01562 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC2.9□□□□□ -1.95
IFNA1P01562 BTF3P10-201ENST00000433415 495 ntBASIC2.9□□□□□ -1.95
IFNA1P01562 B3GNT2P1-201ENST00000434960 952 ntBASIC2.9□□□□□ -1.95
IFNA1P01562 HIGD1AP11-201ENST00000438361 280 ntBASIC2.9□□□□□ -1.95
IFNA1P01562 RPL23AP33-201ENST00000442301 452 ntBASIC2.9□□□□□ -1.95
IFNA1P01562 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.9□□□□□ -1.95
IFNA1P01562 MTND2P28-201ENST00000457540 1044 ntBASIC2.9□□□□□ -1.95
IFNA1P01562 RPS23P7-201ENST00000466210 444 ntBASIC2.9□□□□□ -1.95
IFNA1P01562 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
IFNA1P01562 NDUFB5P1-201ENST00000508134 564 ntBASIC2.9□□□□□ -1.95
IFNA1P01562 MTND4LP22-201ENST00000508209 276 ntBASIC2.9□□□□□ -1.95
IFNA1P01562 RNA5SP179-201ENST00000517284 121 ntBASIC2.9□□□□□ -1.95
IFNA1P01562 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.95
IFNA1P01562 TRAV8-5-201ENST00000537369 341 ntBASIC2.9□□□□□ -1.95
IFNA1P01562 TRAV37-201ENST00000553906 342 ntBASIC2.9□□□□□ -1.95
IFNA1P01562 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC2.9□□□□□ -1.95
IFNA1P01562 AC037471.2-201ENST00000564941 598 ntBASIC2.9□□□□□ -1.95
IFNA1P01562 MTND4LP24-201ENST00000572277 291 ntBASIC2.9□□□□□ -1.95
IFNA1P01562 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.9□□□□□ -1.95
IFNA1P01562 AC027281.1-201ENST00000574178 758 ntBASIC2.9□□□□□ -1.95
IFNA1P01562 AC005951.1-201ENST00000576706 485 ntBASIC2.9□□□□□ -1.95
IFNA1P01562 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC2.9□□□□□ -1.95
IFNA1P01562 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC2.9□□□□□ -1.95
IFNA1P01562 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC2.9□□□□□ -1.95
IFNA1P01562 AC245128.3-201ENST00000594721 748 ntBASIC2.9□□□□□ -1.95
IFNA1P01562 PCNAP1-202ENST00000595299 752 ntBASIC2.9□□□□□ -1.95
IFNA1P01562 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
IFNA1P01562 AC091167.4-201ENST00000605079 184 ntBASIC2.9□□□□□ -1.95
IFNA1P01562 AC090525.3-201ENST00000605601 189 ntBASIC2.9□□□□□ -1.95
IFNA1P01562 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
IFNA1P01562 HMGN2P28-201ENST00000606102 262 ntBASIC2.9□□□□□ -1.95
IFNA1P01562 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
IFNA1P01562 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC2.9□□□□□ -1.95
IFNA1P01562 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
IFNA1P01562 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC2.9□□□□□ -1.95
IFNA1P01562 SRP72P2-201ENST00000344851 1979 ntBASIC2.9□□□□□ -1.95
IFNA1P01562 AL136164.4-201ENST00000625013 2135 ntBASIC2.9□□□□□ -1.95
IFNA1P01562 AC006042.3-201ENST00000454684 1469 ntBASIC2.9□□□□□ -1.95
IFNA1P01562 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
IFNA1P01562 AC090337.1-201ENST00000579651 2074 ntBASIC2.89□□□□□ -1.95
IFNA1P01562 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.89□□□□□ -1.95
IFNA1P01562 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.89□□□□□ -1.95
IFNA1P01562 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC2.89□□□□□ -1.95
IFNA1P01562 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
IFNA1P01562 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
IFNA1P01562 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
IFNA1P01562 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
IFNA1P01562 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC2.89□□□□□ -1.95
IFNA1P01562 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.89□□□□□ -1.95
IFNA1P01562 ZNF736P2Y-201ENST00000416040 1279 ntBASIC2.89□□□□□ -1.95
IFNA1P01562 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.89□□□□□ -1.95
IFNA1P01562 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC2.89□□□□□ -1.95
IFNA1P01562 RPEP3-201ENST00000425462 676 ntBASIC2.89□□□□□ -1.95
IFNA1P01562 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC2.89□□□□□ -1.95
IFNA1P01562 RPS3AP54-201ENST00000435535 734 ntBASIC2.89□□□□□ -1.95
IFNA1P01562 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.89□□□□□ -1.95
IFNA1P01562 TRIM60P18-201ENST00000441518 828 ntBASIC2.89□□□□□ -1.95
IFNA1P01562 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC2.89□□□□□ -1.95
IFNA1P01562 RPL7P59-201ENST00000447700 943 ntBASIC2.89□□□□□ -1.95
IFNA1P01562 RPS11P1-201ENST00000451072 473 ntBASIC2.89□□□□□ -1.95
IFNA1P01562 AC006463.2-201ENST00000473326 348 ntBASIC2.89□□□□□ -1.95
IFNA1P01562 AC004453.1-201ENST00000487895 408 ntBASIC2.89□□□□□ -1.95
IFNA1P01562 RAC1P2-201ENST00000511164 579 ntBASIC2.89□□□□□ -1.95
IFNA1P01562 SNORA64.4-201ENST00000516632 81 ntBASIC2.89□□□□□ -1.95
IFNA1P01562 AC010476.1-201ENST00000519111 851 ntBASIC2.89□□□□□ -1.95
IFNA1P01562 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms