Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LDLRP01130 AC067945.1-201ENST00000342609 618 ntBASIC4.34□□□□□ -1.71
LDLRP01130 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
LDLRP01130 OR52E6-202ENST00000379946 954 ntBASIC4.34□□□□□ -1.71
LDLRP01130 AC025750.1-201ENST00000399891 379 ntBASIC4.34□□□□□ -1.71
LDLRP01130 AL078595.1-201ENST00000404458 226 ntBASIC4.34□□□□□ -1.71
LDLRP01130 VN1R8P-201ENST00000407739 893 ntBASIC4.34□□□□□ -1.71
LDLRP01130 RN7SKP167-201ENST00000411047 285 ntBASIC4.34□□□□□ -1.71
LDLRP01130 AC114755.2-201ENST00000413520 361 ntBASIC4.34□□□□□ -1.71
LDLRP01130 MTATP6P20-201ENST00000414147 562 ntBASIC4.34□□□□□ -1.71
LDLRP01130 HSFY4P-201ENST00000415994 1181 ntBASIC4.34□□□□□ -1.71
LDLRP01130 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LDLRP01130 XKRYP1-201ENST00000423438 492 ntBASIC4.34□□□□□ -1.71
LDLRP01130 RPEP3-201ENST00000425462 676 ntBASIC4.34□□□□□ -1.71
LDLRP01130 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.34□□□□□ -1.71
LDLRP01130 RPL23AP25-201ENST00000430973 463 ntBASIC4.34□□□□□ -1.71
LDLRP01130 XKRYP2-201ENST00000432915 492 ntBASIC4.34□□□□□ -1.71
LDLRP01130 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
LDLRP01130 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.34□□□□□ -1.71
LDLRP01130 UBE2V1P5-201ENST00000440070 405 ntBASIC4.34□□□□□ -1.71
LDLRP01130 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
LDLRP01130 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.34□□□□□ -1.71
LDLRP01130 AC034236.1-201ENST00000469891 373 ntBASIC4.34□□□□□ -1.71
LDLRP01130 RPL23AP71-201ENST00000470966 469 ntBASIC4.34□□□□□ -1.71
LDLRP01130 AC022034.3-201ENST00000471393 478 ntBASIC4.34□□□□□ -1.71
LDLRP01130 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.34□□□□□ -1.71
LDLRP01130 SCARNA22-201ENST00000503991 125 ntBASIC4.34□□□□□ -1.71
LDLRP01130 HPRT1P2-201ENST00000505250 544 ntBASIC4.34□□□□□ -1.71
LDLRP01130 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
LDLRP01130 MTND4LP31-201ENST00000514859 294 ntBASIC4.34□□□□□ -1.71
LDLRP01130 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.34□□□□□ -1.71
LDLRP01130 AC010306.1-201ENST00000523223 1117 ntBASIC4.34□□□□□ -1.71
LDLRP01130 UBTFL10-201ENST00000528532 562 ntBASIC4.34□□□□□ -1.71
LDLRP01130 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.34□□□□□ -1.71
LDLRP01130 AC069240.1-201ENST00000548774 375 ntBASIC4.34□□□□□ -1.71
LDLRP01130 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.34□□□□□ -1.71
LDLRP01130 NIFKP8-201ENST00000560500 874 ntBASIC4.34□□□□□ -1.71
LDLRP01130 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.34□□□□□ -1.71
LDLRP01130 AC069366.1-201ENST00000583159 838 ntBASIC4.34□□□□□ -1.71
LDLRP01130 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LDLRP01130 NIFKP6-201ENST00000598115 845 ntBASIC4.34□□□□□ -1.71
LDLRP01130 AC234772.3-201ENST00000602277 528 ntBASIC4.34□□□□□ -1.71
LDLRP01130 AL022161.1-201ENST00000604390 213 ntBASIC4.34□□□□□ -1.71
LDLRP01130 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.34□□□□□ -1.71
LDLRP01130 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.34□□□□□ -1.71
LDLRP01130 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
LDLRP01130 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.34□□□□□ -1.71
LDLRP01130 AC091905.2-201ENST00000623143 306 ntBASIC4.34□□□□□ -1.71
LDLRP01130 AC004943.3-201ENST00000624116 600 ntBASIC4.34□□□□□ -1.71
LDLRP01130 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.34□□□□□ -1.71
LDLRP01130 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.34□□□□□ -1.71
LDLRP01130 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.34□□□□□ -1.71
LDLRP01130 OR2L1P-202ENST00000641567 1023 ntBASIC4.34□□□□□ -1.71
LDLRP01130 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.34□□□□□ -1.71
LDLRP01130 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LDLRP01130 KPNA2P2-201ENST00000419546 1489 ntBASIC4.34□□□□□ -1.71
LDLRP01130 NSRP1P1-201ENST00000444067 1693 ntBASIC4.34□□□□□ -1.71
LDLRP01130 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
LDLRP01130 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.33□□□□□ -1.72
LDLRP01130 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LDLRP01130 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
LDLRP01130 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.33□□□□□ -1.72
LDLRP01130 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.33□□□□□ -1.72
LDLRP01130 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.33□□□□□ -1.72
LDLRP01130 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
LDLRP01130 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.33□□□□□ -1.72
LDLRP01130 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LDLRP01130 ANKRD36P1-201ENST00000344424 659 ntBASIC4.33□□□□□ -1.72
LDLRP01130 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LDLRP01130 RNA5SP509-201ENST00000364577 119 ntBASIC4.33□□□□□ -1.72
LDLRP01130 RNA5SP151-201ENST00000365632 117 ntBASIC4.33□□□□□ -1.72
LDLRP01130 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
LDLRP01130 AL359837.1-201ENST00000381357 287 ntBASIC4.33□□□□□ -1.72
LDLRP01130 RNU1-44P-201ENST00000384453 163 ntBASIC4.33□□□□□ -1.72
LDLRP01130 SNORD116-12-201ENST00000384468 92 ntBASIC4.33□□□□□ -1.72
LDLRP01130 TAS2R15P-201ENST00000390674 928 ntBASIC4.33□□□□□ -1.72
LDLRP01130 RNA5SP397-201ENST00000391323 118 ntBASIC4.33□□□□□ -1.72
LDLRP01130 MTCO2P31-201ENST00000402702 684 ntBASIC4.33□□□□□ -1.72
LDLRP01130 OR51B3P-201ENST00000412287 913 ntBASIC4.33□□□□□ -1.72
LDLRP01130 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.33□□□□□ -1.72
LDLRP01130 TRGV6-201ENST00000417928 299 ntBASIC4.33□□□□□ -1.72
LDLRP01130 AL389915.1-201ENST00000422463 466 ntBASIC4.33□□□□□ -1.72
LDLRP01130 C1DP1-201ENST00000426049 402 ntBASIC4.33□□□□□ -1.72
LDLRP01130 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.33□□□□□ -1.72
LDLRP01130 AC073069.1-201ENST00000428657 441 ntBASIC4.33□□□□□ -1.72
LDLRP01130 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.33□□□□□ -1.72
LDLRP01130 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.33□□□□□ -1.72
LDLRP01130 RPL7P34-201ENST00000433316 712 ntBASIC4.33□□□□□ -1.72
LDLRP01130 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.33□□□□□ -1.72
LDLRP01130 YWHAQP9-201ENST00000445891 512 ntBASIC4.33□□□□□ -1.72
LDLRP01130 AL359073.1-201ENST00000448036 403 ntBASIC4.33□□□□□ -1.72
LDLRP01130 TPMTP4-201ENST00000450749 678 ntBASIC4.33□□□□□ -1.72
LDLRP01130 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.33□□□□□ -1.72
LDLRP01130 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.33□□□□□ -1.72
LDLRP01130 AC090142.1-201ENST00000465776 462 ntBASIC4.33□□□□□ -1.72
LDLRP01130 AC011276.1-201ENST00000469688 323 ntBASIC4.33□□□□□ -1.72
LDLRP01130 AC073522.1-201ENST00000483312 377 ntBASIC4.33□□□□□ -1.72
LDLRP01130 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.33□□□□□ -1.72
LDLRP01130 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
LDLRP01130 AC098799.3-201ENST00000506095 438 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 839.2 ms