Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-2O95096 AL122126.1-201ENST00000546905 1318 ntBASIC4.23□□□□□ -1.73
NKX2-2O95096 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-2O95096 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-2O95096 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
NKX2-2O95096 OR51H2P-202ENST00000641424 3046 ntBASIC4.23□□□□□ -1.73
NKX2-2O95096 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.23□□□□□ -1.73
NKX2-2O95096 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-2O95096 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-2O95096 Y_RNA.25-201ENST00000362528 102 ntBASIC4.23□□□□□ -1.73
NKX2-2O95096 RNU1-85P-201ENST00000364127 164 ntBASIC4.23□□□□□ -1.73
NKX2-2O95096 AC068533.2-201ENST00000411872 306 ntBASIC4.23□□□□□ -1.73
NKX2-2O95096 SETP15-201ENST00000412724 337 ntBASIC4.23□□□□□ -1.73
NKX2-2O95096 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.23□□□□□ -1.73
NKX2-2O95096 RAD23BP1-201ENST00000421404 1227 ntBASIC4.23□□□□□ -1.73
NKX2-2O95096 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.23□□□□□ -1.73
NKX2-2O95096 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.23□□□□□ -1.73
NKX2-2O95096 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.23□□□□□ -1.73
NKX2-2O95096 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.23□□□□□ -1.73
NKX2-2O95096 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.23□□□□□ -1.73
NKX2-2O95096 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.23□□□□□ -1.73
NKX2-2O95096 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.23□□□□□ -1.73
NKX2-2O95096 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.23□□□□□ -1.73
NKX2-2O95096 ANKRD26P4-201ENST00000455755 950 ntBASIC4.23□□□□□ -1.73
NKX2-2O95096 AC087385.1-201ENST00000475062 312 ntBASIC4.23□□□□□ -1.73
NKX2-2O95096 AC231760.1-201ENST00000498002 260 ntBASIC4.23□□□□□ -1.73
NKX2-2O95096 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.23□□□□□ -1.73
NKX2-2O95096 AC104090.1-201ENST00000506341 1171 ntBASIC4.23□□□□□ -1.73
NKX2-2O95096 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.23□□□□□ -1.73
NKX2-2O95096 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-2O95096 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.23□□□□□ -1.73
NKX2-2O95096 NDUFB4P12-201ENST00000513465 390 ntBASIC4.23□□□□□ -1.73
NKX2-2O95096 AC104057.1-201ENST00000515547 497 ntBASIC4.23□□□□□ -1.73
NKX2-2O95096 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.23□□□□□ -1.73
NKX2-2O95096 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.23□□□□□ -1.73
NKX2-2O95096 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.23□□□□□ -1.73
NKX2-2O95096 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.23□□□□□ -1.73
NKX2-2O95096 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-2O95096 AL389895.1-201ENST00000554127 252 ntBASIC4.23□□□□□ -1.73
NKX2-2O95096 ATP5J2P6-201ENST00000565203 266 ntBASIC4.23□□□□□ -1.73
NKX2-2O95096 MIR4270-201ENST00000581799 70 ntBASIC4.23□□□□□ -1.73
NKX2-2O95096 AC107982.3-201ENST00000584957 985 ntBASIC4.23□□□□□ -1.73
NKX2-2O95096 NIFKP6-201ENST00000598115 845 ntBASIC4.23□□□□□ -1.73
NKX2-2O95096 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-2O95096 ELOCP35-201ENST00000604289 336 ntBASIC4.23□□□□□ -1.73
NKX2-2O95096 AC024940.4-201ENST00000605507 246 ntBASIC4.23□□□□□ -1.73
NKX2-2O95096 BNIP3P41-202ENST00000616656 861 ntBASIC4.23□□□□□ -1.73
NKX2-2O95096 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.23□□□□□ -1.73
NKX2-2O95096 AC068722.2-201ENST00000618734 544 ntBASIC4.23□□□□□ -1.73
NKX2-2O95096 AP000484.1-201ENST00000620067 1252 ntBASIC4.23□□□□□ -1.73
NKX2-2O95096 AC000123.2-201ENST00000623124 461 ntBASIC4.23□□□□□ -1.73
NKX2-2O95096 AP001784.1-201ENST00000624107 428 ntBASIC4.23□□□□□ -1.73
NKX2-2O95096 AC120349.2-201ENST00000625002 298 ntBASIC4.23□□□□□ -1.73
NKX2-2O95096 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-2O95096 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-2O95096 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-2O95096 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.23□□□□□ -1.73
NKX2-2O95096 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-2O95096 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.23□□□□□ -1.73
NKX2-2O95096 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.22□□□□□ -1.73
NKX2-2O95096 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NKX2-2O95096 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NKX2-2O95096 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.22□□□□□ -1.73
NKX2-2O95096 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
NKX2-2O95096 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NKX2-2O95096 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.22□□□□□ -1.73
NKX2-2O95096 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NKX2-2O95096 RNU6-216P-201ENST00000363282 104 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 RNA5SP151-201ENST00000365632 117 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NKX2-2O95096 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 ENSAP1-201ENST00000392855 326 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 TAF9BP1-201ENST00000396646 746 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 AF228730.1-201ENST00000397972 663 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 AL049697.2-201ENST00000403708 294 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.22□□□□□ -1.73
NKX2-2O95096 RN7SKP106-201ENST00000410832 272 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 MTND4P22-201ENST00000413116 1169 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 AC073136.2-201ENST00000417282 849 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 MTND2P16-201ENST00000419987 799 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.22□□□□□ -1.73
NKX2-2O95096 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NKX2-2O95096 VDAC1P6-201ENST00000430062 855 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.22□□□□□ -1.73
NKX2-2O95096 CETN4P-201ENST00000432407 469 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 AL049745.1-201ENST00000433953 286 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.22□□□□□ -1.73
NKX2-2O95096 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.22□□□□□ -1.73
NKX2-2O95096 AC006466.1-201ENST00000438721 289 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 MTCYBP31-201ENST00000438855 1122 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 MTCO1P48-201ENST00000448024 1096 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.22□□□□□ -1.73
NKX2-2O95096 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.22□□□□□ -1.73
NKX2-2O95096 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.22□□□□□ -1.73
NKX2-2O95096 MTCO3P2-201ENST00000457365 171 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 RPL35AP28-201ENST00000459730 331 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 RPL12P20-201ENST00000475538 479 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 AC013828.1-201ENST00000481845 158 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 AC108022.1-201ENST00000493466 478 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms