Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 VN1R42P-201ENST00000424651 344 ntBASIC4□□□□□ -1.77
SDC3O75056 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4□□□□□ -1.77
SDC3O75056 AL035246.1-201ENST00000433554 1255 ntBASIC4□□□□□ -1.77
SDC3O75056 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4□□□□□ -1.77
SDC3O75056 YWHAQP9-201ENST00000445891 512 ntBASIC4□□□□□ -1.77
SDC3O75056 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4□□□□□ -1.77
SDC3O75056 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4□□□□□ -1.77
SDC3O75056 AL500522.2-201ENST00000448562 343 ntBASIC4□□□□□ -1.77
SDC3O75056 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4□□□□□ -1.77
SDC3O75056 CYCSP53-201ENST00000455540 265 ntBASIC4□□□□□ -1.77
SDC3O75056 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4□□□□□ -1.77
SDC3O75056 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4□□□□□ -1.77
SDC3O75056 AC096992.1-201ENST00000459808 709 ntBASIC4□□□□□ -1.77
SDC3O75056 RPL7P1-201ENST00000468161 747 ntBASIC4□□□□□ -1.77
SDC3O75056 RPL7P9-201ENST00000468715 747 ntBASIC4□□□□□ -1.77
SDC3O75056 HMGB1P21-201ENST00000502313 581 ntBASIC4□□□□□ -1.77
SDC3O75056 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4□□□□□ -1.77
SDC3O75056 AC110792.2-201ENST00000510278 224 ntBASIC4□□□□□ -1.77
SDC3O75056 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4□□□□□ -1.77
SDC3O75056 AC018797.3-201ENST00000513388 1241 ntBASIC4□□□□□ -1.77
SDC3O75056 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4□□□□□ -1.77
SDC3O75056 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SDC3O75056 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SDC3O75056 AC104229.1-201ENST00000561364 255 ntBASIC4□□□□□ -1.77
SDC3O75056 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4□□□□□ -1.77
SDC3O75056 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4□□□□□ -1.77
SDC3O75056 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4□□□□□ -1.77
SDC3O75056 AL451044.1-201ENST00000604867 238 ntBASIC4□□□□□ -1.77
SDC3O75056 OR2BH1P-201ENST00000608850 864 ntBASIC4□□□□□ -1.77
SDC3O75056 OR6R2P-201ENST00000609216 300 ntBASIC4□□□□□ -1.77
SDC3O75056 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4□□□□□ -1.77
SDC3O75056 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4□□□□□ -1.77
SDC3O75056 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SDC3O75056 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4□□□□□ -1.77
SDC3O75056 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4□□□□□ -1.77
SDC3O75056 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SDC3O75056 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4□□□□□ -1.77
SDC3O75056 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SDC3O75056 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4□□□□□ -1.77
SDC3O75056 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4□□□□□ -1.77
SDC3O75056 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SDC3O75056 OR11H5P-202ENST00000641612 1325 ntBASIC3.99□□□□□ -1.77
SDC3O75056 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SDC3O75056 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SDC3O75056 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.99□□□□□ -1.77
SDC3O75056 SNORD35B-201ENST00000363660 87 ntBASIC3.99□□□□□ -1.77
SDC3O75056 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.99□□□□□ -1.77
SDC3O75056 OR6K3-202ENST00000368146 996 ntBASIC3.99□□□□□ -1.77
SDC3O75056 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SDC3O75056 RNU6-796P-201ENST00000391086 107 ntBASIC3.99□□□□□ -1.77
SDC3O75056 AC004987.3-201ENST00000413879 771 ntBASIC3.99□□□□□ -1.77
SDC3O75056 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.99□□□□□ -1.77
SDC3O75056 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.99□□□□□ -1.77
SDC3O75056 AL158050.1-201ENST00000416077 457 ntBASIC3.99□□□□□ -1.77
SDC3O75056 RPS12P23-201ENST00000419579 400 ntBASIC3.99□□□□□ -1.77
SDC3O75056 AC069157.1-201ENST00000421749 137 ntBASIC3.99□□□□□ -1.77
SDC3O75056 AC005189.1-201ENST00000431286 310 ntBASIC3.99□□□□□ -1.77
SDC3O75056 AC023347.2-201ENST00000433994 462 ntBASIC3.99□□□□□ -1.77
SDC3O75056 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.99□□□□□ -1.77
SDC3O75056 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.99□□□□□ -1.77
SDC3O75056 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SDC3O75056 ABCF2P2-201ENST00000450549 296 ntBASIC3.99□□□□□ -1.77
SDC3O75056 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.99□□□□□ -1.77
SDC3O75056 RPL29P14-201ENST00000495837 428 ntBASIC3.99□□□□□ -1.77
SDC3O75056 AL035404.1-201ENST00000497982 568 ntBASIC3.99□□□□□ -1.77
SDC3O75056 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.99□□□□□ -1.77
SDC3O75056 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.99□□□□□ -1.77
SDC3O75056 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.99□□□□□ -1.77
SDC3O75056 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.99□□□□□ -1.77
SDC3O75056 TRMT10BP1-201ENST00000519377 943 ntBASIC3.99□□□□□ -1.77
SDC3O75056 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SDC3O75056 IGLV3-26-201ENST00000520756 302 ntBASIC3.99□□□□□ -1.77
SDC3O75056 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.99□□□□□ -1.77
SDC3O75056 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.99□□□□□ -1.77
SDC3O75056 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.99□□□□□ -1.77
SDC3O75056 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
SDC3O75056 AC106734.1-201ENST00000568646 663 ntBASIC3.99□□□□□ -1.77
SDC3O75056 AC025627.2-201ENST00000576220 160 ntBASIC3.99□□□□□ -1.77
SDC3O75056 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.99□□□□□ -1.77
SDC3O75056 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.99□□□□□ -1.77
SDC3O75056 AC112230.1-201ENST00000604342 547 ntBASIC3.99□□□□□ -1.77
SDC3O75056 AC090246.1-201ENST00000616499 426 ntBASIC3.99□□□□□ -1.77
SDC3O75056 AL354798.1-201ENST00000622505 329 ntBASIC3.99□□□□□ -1.77
SDC3O75056 U6.107-201ENST00000637108 79 ntBASIC3.99□□□□□ -1.77
SDC3O75056 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SDC3O75056 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SDC3O75056 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SDC3O75056 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SDC3O75056 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.99□□□□□ -1.77
SDC3O75056 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
SDC3O75056 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
SDC3O75056 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SDC3O75056 AC008432.1-201ENST00000615912 1320 ntBASIC3.98□□□□□ -1.77
SDC3O75056 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
SDC3O75056 MTCO1P4-201ENST00000520516 1409 ntBASIC3.98□□□□□ -1.77
SDC3O75056 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SDC3O75056 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SDC3O75056 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SDC3O75056 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.98□□□□□ -1.77
SDC3O75056 RNA5SP22-201ENST00000365393 109 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms