Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 BNIP3P33-201ENST00000598912 569 ntBASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 MTATP6P2-201ENST00000603319 678 ntBASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 ELOCP34-201ENST00000604436 327 ntBASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 AC112503.2-201ENST00000609005 552 ntBASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 AC245100.7-201ENST00000609678 442 ntBASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
NEDD8-MDP1E9PL57 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 AC010329.2-201ENST00000595195 2737 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 OR11H5P-202ENST00000641612 1325 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 OR4A15-201ENST00000314706 1035 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 RHOT1P2-201ENST00000366423 333 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 RNU6-98P-201ENST00000384173 107 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 MIR670-201ENST00000390142 98 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 NCSTNP1-201ENST00000406229 144 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 MIR1251-201ENST00000408552 70 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 AL450992.3-201ENST00000413192 568 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 LINC01881-201ENST00000416103 412 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 MTND4P11-201ENST00000417020 1058 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 AC099336.2-201ENST00000422457 254 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 AC018644.1-201ENST00000429934 551 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 ETF1P3-201ENST00000430422 1160 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 MED6P1-201ENST00000439659 713 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 AL353748.1-201ENST00000440753 474 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 AC099560.2-201ENST00000457554 255 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 RPS3AP6-201ENST00000484430 795 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 AC112518.2-201ENST00000508565 425 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 MTCO3P27-201ENST00000514397 196 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 RNU6-352P-201ENST00000516908 107 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 CYCSP30-201ENST00000546447 172 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 AL121594.4-201ENST00000556211 1196 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 CYP4A43P-201ENST00000568156 121 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 AC124283.4-201ENST00000581815 456 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 AC104662.1-201ENST00000604448 511 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 AC021851.1-201ENST00000608537 1082 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 AP005229.2-201ENST00000609980 697 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 AL139089.1-201ENST00000620372 975 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 CR392039.5-201ENST00000623201 510 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 HSPD1P11-201ENST00000508643 1702 ntBASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.06□□□□□ -1.76
NEDD8-MDP1E9PL57 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 RNU6-354P-201ENST00000383862 107 ntBASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 RNU6-610P-201ENST00000384264 107 ntBASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 RN7SKP156-201ENST00000410308 342 ntBASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 SNORA57.3-201ENST00000411095 141 ntBASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 RPL7AP73-201ENST00000413490 353 ntBASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 VTA1P1-201ENST00000414044 866 ntBASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 ARL5AP2-201ENST00000444698 533 ntBASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 AC092685.1-201ENST00000447960 1243 ntBASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 AL500522.2-201ENST00000448562 343 ntBASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 HMGN1P5-201ENST00000448591 263 ntBASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 RPL23AP12-201ENST00000467573 473 ntBASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 RN7SL585P-201ENST00000470538 280 ntBASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 NAMPTP2-201ENST00000505629 1115 ntBASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 AP003355.1-201ENST00000518956 587 ntBASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms