Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 AC068254.2-201ENST00000623938 3577 ntBASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 XPOTP1-201ENST00000443317 2398 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 EXOC5P1-201ENST00000510543 1969 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 ZNF33CP-201ENST00000432492 2030 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AL512646.1-201ENST00000269395 1077 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 RNU1-15P-201ENST00000353977 144 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 SNORA63.3-201ENST00000362682 132 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AC025750.1-201ENST00000399891 379 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 RN7SKP182-201ENST00000410772 298 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 RNA5SP104-201ENST00000410989 118 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 RN7SKP167-201ENST00000411047 285 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 RPS23P10-201ENST00000416185 486 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AL161631.1-201ENST00000417933 486 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AL391219.1-201ENST00000422570 483 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AL512637.2-201ENST00000431287 1256 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 BTF3P10-201ENST00000433415 495 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AC122718.1-201ENST00000439448 744 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 CDC27P1-201ENST00000445384 715 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AC239367.2-201ENST00000447309 705 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 FAM133DP-201ENST00000464802 691 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AC018635.1-201ENST00000468292 1030 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AC087385.1-201ENST00000475062 312 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AC068305.1-201ENST00000497406 726 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 RPS27AP13-201ENST00000498403 237 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AC025445.1-201ENST00000502728 300 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 RPL7L1P13-201ENST00000511702 739 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 IGKV2D-23-201ENST00000518179 286 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 OR8R1P-201ENST00000543943 764 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AC106785.1-201ENST00000565935 262 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AC090079.2-201ENST00000575289 768 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AP005229.2-201ENST00000609980 697 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AC105429.2-201ENST00000610567 517 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 FAM27D1-201ENST00000612308 341 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 MIR7154-201ENST00000620673 73 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AC019278.1-201ENST00000623516 479 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AC055839.1-201ENST00000634467 498 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 AC017104.5-201ENST00000637647 639 ntBASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPIPA2E9PIF3 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.84□□□□□ -1.79
NPIPA2E9PIF3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.84□□□□□ -1.79
NPIPA2E9PIF3 ASNSP1-204ENST00000641977 1664 ntBASIC3.84□□□□□ -1.79
NPIPA2E9PIF3 AL031985.3-201ENST00000565390 2449 ntBASIC3.84□□□□□ -1.79
NPIPA2E9PIF3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.84□□□□□ -1.79
NPIPA2E9PIF3 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NPIPA2E9PIF3 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.84□□□□□ -1.79
NPIPA2E9PIF3 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
NPIPA2E9PIF3 MIR372-201ENST00000362225 67 ntBASIC3.84□□□□□ -1.79
NPIPA2E9PIF3 RNU6-1339P-201ENST00000363574 91 ntBASIC3.84□□□□□ -1.79
NPIPA2E9PIF3 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.84□□□□□ -1.79
NPIPA2E9PIF3 PRELID3BP11-201ENST00000414230 479 ntBASIC3.84□□□□□ -1.79
NPIPA2E9PIF3 AC108032.1-201ENST00000416706 207 ntBASIC3.84□□□□□ -1.79
NPIPA2E9PIF3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.84□□□□□ -1.79
NPIPA2E9PIF3 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.84□□□□□ -1.79
NPIPA2E9PIF3 AC004552.1-201ENST00000419089 348 ntBASIC3.84□□□□□ -1.79
NPIPA2E9PIF3 RPL31P45-201ENST00000419532 356 ntBASIC3.84□□□□□ -1.79
NPIPA2E9PIF3 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.84□□□□□ -1.79
NPIPA2E9PIF3 AC093698.1-201ENST00000423843 571 ntBASIC3.84□□□□□ -1.79
NPIPA2E9PIF3 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.84□□□□□ -1.79
NPIPA2E9PIF3 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.84□□□□□ -1.79
NPIPA2E9PIF3 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.84□□□□□ -1.79
NPIPA2E9PIF3 RPS26P30-201ENST00000443431 335 ntBASIC3.84□□□□□ -1.79
NPIPA2E9PIF3 MRPL35P4-201ENST00000453682 566 ntBASIC3.84□□□□□ -1.79
NPIPA2E9PIF3 RPS26P3-201ENST00000470205 348 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms